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cg2_3.0_scaffold_8451_c_6

Organism: Actinobacteria bacterium CG2_30_50_142

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(7211..7837)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase ECF-type sigma factor n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9K2_CALAS similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 176.0
  • Bit_score: 134
  • Evalue 1.50e-28
  • rbh
putative RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Solirubrobact_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 208.0
  • Bit_score: 403
  • Evalue 1.90e-109
putative RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 176.0
  • Bit_score: 134
  • Evalue 4.30e-29

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Taxonomy

CG_Solirubrobact_01 → Rubrobacteridae → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGAATAACCTCAAGAATCTCGACGTCCTGGTGATGAACGCAAAACAACTAAACGCAGATGCGTTGACGGCGCTCTATGATAATTACCTTCCGCATGTGTTCCGGTACATTTACTACCAGGTAAACGACAGGCCTTTGGCCGAAGACCTCACATCAGAGGTGTTCCTAAAGATGCTTGTCGCGATACCTGATTTCAGGGAAGACGGCAAGTCGTTTTATCCGTGGCTCTTAAGAATAGCCAAGAATACGACGCTGGATTACCTGAGGTCTAAATCCAAACGGTCGCACGTATTGTTTGACGATGATATCGAAGAGCTTCTCTTTGAAAGCAGAAATAAAGCCGACCTTGAGCAAACCGTAATCTCGGCGCTCGATGCAGAAGAGGTCAAAAAAGCCGTCGTAAAACTTACAGATGAGCAGCAGCAGGTACTTCTGCTGAAGTTTACAATGGGGCTCTCCAATAACGGGATCGGCAAGGTGCTCGAAAAAACCGAAGGGTCGATAAAGTCGTTGCAAGTAAGGGCTCTCGCTTCTCTTAGAAGATTGCTCGAGAGGCAGGAGGAGCCGGAAGAACGGGTTGAGCCGATGATTACCGAAGCCAAGAAATCCCTTTTCAGGAAGGCTTAG
PROTEIN sequence
Length: 209
MNNLKNLDVLVMNAKQLNADALTALYDNYLPHVFRYIYYQVNDRPLAEDLTSEVFLKMLVAIPDFREDGKSFYPWLLRIAKNTTLDYLRSKSKRSHVLFDDDIEELLFESRNKADLEQTVISALDAEEVKKAVVKLTDEQQQVLLLKFTMGLSNNGIGKVLEKTEGSIKSLQVRALASLRRLLERQEEPEERVEPMITEAKKSLFRKA*