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cg2_3.0_scaffold_6519_c_6

Organism: Actinobacteria bacterium CG2_30_50_142

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 6824..8053

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=2 Tax=Frankia RepID=Q0RP58_FRAAA similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 404.0
  • Bit_score: 519
  • Evalue 3.30e-144
  • rbh
RpoD family RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=CG_Solirubrobact_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 409.0
  • Bit_score: 779
  • Evalue 3.30e-222
rpoD; RNA polymerase essential primary sigma 70 factor similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 404.0
  • Bit_score: 519
  • Evalue 9.40e-145

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Taxonomy

CG_Solirubrobact_01 → Rubrobacteridae → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1230
GTGAATACCCGCATAAACGAGCTTGAAATCCCAGAAGTAAAACAACTGATTGCGACGGGCCAGGAAAAAGGCGTCCTTACTGCGGATCAAATTAACGATGCTCTTGAAGCGGTTGATTTAACAAGTGAGCAAATCGATAATATCTACATCCACTTGTTCAATGCCGGCGTAGAGATTATCGGTATCAGCGATGACAACGAGGATGAGGACGAACTGGATGTCGATCCGGAGACAGAAGAGACCAAGGTCCTTCCCGAAGAGGAGGAAGAAGAAGCAAAAAAGGCAGTCGTTCAAGAGATTGACCTCTCCGTTAAGGCTCCGACGAATGATCCTGTACGCATGTACCTCAAAGAGATCGGCAAGGTGCCGCTTCTAACCGCCAAAGAGGAGGTCACGCTTGCTAAGAGAATCGAGGCGGGGGAGAAAGCCGCCGAAACACTCGAGCGCGAGGAAGAAAGCCTTCCGAGAGATGAGGTGCGCAAGCTTCGCAGGGTCGAGCGCGACGGGATGAACGCCAAGAAGAAGCTCGTTGAGGCGAACTTAAGGCTGGTCGTCAGCATCGCAAAACGCTATGTTGGACGTGGGATGCTCTTCCTCGACCTGATTCAGGAGGGTAACCTGGGCCTTATCCGCGCGGTTGAAAAATTCGATTACCGTAAGGGGTTTAAGTTCAGTACATATGCAACCTGGTGGATACGCCAGGCTATAACCAGGGCAATCGCCGACCAGGCACGAACGATCCGCATACCGGTGCACATGGTCGAGACCATAAACAAACTGATTCGAATCCAGCGCCAGCTGCTGCAGGAACTCGGGCGCGAGCCTATGCCAGAAGAAATAGCCGATGAGATGGGCTTAACTCCGGAGAAGGTTCGAGAAATACTGAAGATATCGCAGGAGCCGGTGTCTCTTGAAACGCCGATCGGCGAGGAAGAAGACAGCCAGCTCGGCGACTTCATCGAGGACCAGGAAGCCGAAGTCCCGGCGGACGCAGCATCGTTCTCGTTGCTGCAAGAGCAGTTGCAGGAGGTGCTTGATACGCTGAGCGAGCGCGAGCGCAAGGTTATTGAGCTGCGCTTCGGCCTCATCGACGGCCACCCGAGAACCCTCGAAGAAGTAGGCCGCGTGTTCGGTGTGACCAGGGAGCGAATCAGGCAGATCGAGTCAAAAACCCTGAGCAAGCTGCGTCACCCAAACCGCAGCGCAAAATTAAGGGATTATCTGGAGTAA
PROTEIN sequence
Length: 410
VNTRINELEIPEVKQLIATGQEKGVLTADQINDALEAVDLTSEQIDNIYIHLFNAGVEIIGISDDNEDEDELDVDPETEETKVLPEEEEEEAKKAVVQEIDLSVKAPTNDPVRMYLKEIGKVPLLTAKEEVTLAKRIEAGEKAAETLEREEESLPRDEVRKLRRVERDGMNAKKKLVEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIRAVEKFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQELGREPMPEEIADEMGLTPEKVREILKISQEPVSLETPIGEEEDSQLGDFIEDQEAEVPADAASFSLLQEQLQEVLDTLSERERKVIELRFGLIDGHPRTLEEVGRVFGVTRERIRQIESKTLSKLRHPNRSAKLRDYLE*