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cg2_3.0_scaffold_1286_c_1

Organism: Nitrospirae bacterium CG2_30_41_42

near complete RP 43 / 55 BSCG 45 / 51 ASCG 12 / 38 MC: 1
Location: 271..1698

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor Tax=CG_Nitrosp_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 475.0
  • Bit_score: 920
  • Evalue 8.10e-265
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 474.0
  • Bit_score: 653
  • Evalue 4.80e-185
similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 472.0
  • Bit_score: 726
  • Evalue 2.10e-206
  • rbh

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Taxonomy

CG_Nitrosp_02 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1428
ATGAGAGAAAGAGACATATTTGAAGAGATAATTGACATAGGTAAGAGACGAGGAATCCTTACCTATGATGAAATAAATGATGCGCTTCCTTCTGAGTTCTTTTCGCCTGATGAAATAGAAGATCTTATGGATATTCTTCAGGATATGGGAGTTAAGGTTGTAGATCATGAGGAGGCGATTCTACCTGAAGAAGAAGTGGAAGAGGAATTAGAAGAGCATGAAAAGACAGAAGACCTCGTACAGGCATATTTCTACTCAATGGGAGATATTTCTATCCTGAAAAGGGATGAAGAGACGGAGCTTGCAAAACGGCTCGAGGCTGGGAAAGAAATCATAAAAGAGATAGTTACTGCCCTACCTCTTTACAAAAAACTCGAAGCCAGTATGAATGGAGAAGAAGAGGAGTTAAATCCTGATGAGGAAAGAACCGACGAAGCCCTTGTAAAGAGTGTGGAAGTCCTTGATAATCTTATGAAAGAAGTTGAAACTATGGACAAGAAGATTGCGAGGTACGAATCATTTAAAGAGCTAAAAAACACTATCAAGGAGAAAAAGAAGAAGAATATTAATACCACAAAGCTTGAGATATTAGCAAAAGAAGTAGAGAAGGCATATAAGAGGGTTAAATCTGAAGTCGGGGTTAAGATCAATGACCTTAAGGCGATATGGACTCGTATTGTAAAGGCAAAGACACTTATCTCGACGGCTAAAAATGAACTGATAACCCGTAACCTTAGACTTGTGGTTAATATTGCAAAAAATTATATTGGAAGAGGGCTTCCTCTTTTGGATCTCATACAGGAAGGCAATATAGGCCTTATGAAGGCTGTTGATAAATTCAAATACGAAAAGGGCTTTAAGTTCAGCACATATGCAACATGGTGGATCAGGCAGGCAATAACAAGGGCTTTAATAGACCAGACAAAGACCATCAGGGTTCCTGTCCATATGATGGAATTCTATAATAGAGTTAGCAAGGCGTCAAGAGAGCTGACACAACAACTTGGAAGAGAACCAACCAATGAGGAAATTGCCCAGAAACTTATTGTTCCAACAAGGAAGGTTGGAGAGGTCTTCAGGGCAATACAAGATCCTATAGCACTCCAGACACCTGTAGGCGATGAGGATACTGAGCTTGAGGATTTTATAGGGGACAAAAATAGCCCATCACCTTATTCTGATGCAGAAAAGATCGAAACCTCTGAGCAAATACAAATGGTGCTGAAGACCTTGACGCCTAAAGAAGAAAAGGTTATAAGTATGAGGTTCGGTATTGGTGCGGATAGAGATCATACCCTTAAAGAGGTTGGAAGACATCTTTCTATAACACGAGAAAGGGTTAGACAGATAGAAGCAAAGGCATTAAGGAAGCTTAAACATCCAAGCAGGCTTAAAGCCCTTAAAAAATTAACGACGACTCCTACTTAA
PROTEIN sequence
Length: 476
MRERDIFEEIIDIGKRRGILTYDEINDALPSEFFSPDEIEDLMDILQDMGVKVVDHEEAILPEEEVEEELEEHEKTEDLVQAYFYSMGDISILKRDEETELAKRLEAGKEIIKEIVTALPLYKKLEASMNGEEEELNPDEERTDEALVKSVEVLDNLMKEVETMDKKIARYESFKELKNTIKEKKKKNINTTKLEILAKEVEKAYKRVKSEVGVKINDLKAIWTRIVKAKTLISTAKNELITRNLRLVVNIAKNYIGRGLPLLDLIQEGNIGLMKAVDKFKYEKGFKFSTYATWWIRQAITRALIDQTKTIRVPVHMMEFYNRVSKASRELTQQLGREPTNEEIAQKLIVPTRKVGEVFRAIQDPIALQTPVGDEDTELEDFIGDKNSPSPYSDAEKIETSEQIQMVLKTLTPKEEKVISMRFGIGADRDHTLKEVGRHLSITRERVRQIEAKALRKLKHPSRLKALKKLTTTPT*