ggKbase home page

cg2_3.0_scaffold_6364_c_1

Organism: CG2_30_FULL_Dehalococcoidia_46_19_curated

near complete RP 44 / 55 BSCG 44 / 51 ASCG 12 / 38
Location: 1..618

Top 3 Functional Annotations

Value Algorithm Source
mechanosensitive ion channel protein MscS; K03442 small conductance mechanosensitive channel Tax=CG_Dehalo_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 190.0
  • Bit_score: 384
  • Evalue 9.00e-104
MscS mechanosensitive ion channel; K03442 small conductance mechanosensitive channel id=1242254 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 191.0
  • Bit_score: 277
  • Evalue 8.50e-72
  • rbh
mechanosensitive ion channel protein MscS similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 182.0
  • Bit_score: 240
  • Evalue 5.50e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Dehalo_02 → Dehalococcoidia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 618
GTTATAGGTATCGCTGTCGGCTTCGGCGCTCAAAGCTTAATCCGCGATTACCTCAGCGGTCTTTTTATCATATTGGAGGACCCATATGATGTCGGTGATGTGGTTAGAGTCGGCGGCATCGCCGGCCTGGTTGAGGAAATAGGCCTACGCCGTACCATTCTCAGGGACCTGGATGGCATAGTTCATTCCATTCCCAACGGCGAAATTAAAACAGCCAGCAATTTTACCAATAGGTATTCCAGGGTAAACCTGAACATCTCAGTGGCTTATGGAGAGAACCTTGACCGCGTTATCAAGGTCATAAATAGAGTGTGCACGGAAATGGCTGAAGACCCCAAATGGAAGGCAGACTTTATTACCACACCACAGGTGCTTAGAGTAGATAATCTCGGCGATTCCGGCATTGACATTAAAATACTGGGGGATACTAAACCAATAAGGCAATGGGATGTGATGGGCGAGTTAAGGCTGCGGCTTAAGAGAACATTCGATGCTGAGGGAATTGAGATTCCATGGCCTCATACCAAAGTTTACTTTGGCAATGCTATCCCCGAAATGGAAGAGGCTAAGCAGCCATTCAGGAAATCCACAGCTACCAGGAAGAGGAAGACGTCTTAA
PROTEIN sequence
Length: 206
VIGIAVGFGAQSLIRDYLSGLFIILEDPYDVGDVVRVGGIAGLVEEIGLRRTILRDLDGIVHSIPNGEIKTASNFTNRYSRVNLNISVAYGENLDRVIKVINRVCTEMAEDPKWKADFITTPQVLRVDNLGDSGIDIKILGDTKPIRQWDVMGELRLRLKRTFDAEGIEIPWPHTKVYFGNAIPEMEEAKQPFRKSTATRKRKTS*