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cg2_3.0_scaffold_325_c_14

Organism: CG2_30_FULL_Oscillatoriales_40_61_curated

near complete RP 52 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(12671..13669)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YY85_LYNSP similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 332.0
  • Bit_score: 477
  • Evalue 1.20e-131
  • rbh
RNA polymerase, sigma 70 subunit, RpoD subfamily Tax=CG_Cyano_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 332.0
  • Bit_score: 644
  • Evalue 1.00e-181
RNA polymerase, sigma 70 subunit, RpoD subfamily similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 316.0
  • Bit_score: 452
  • Evalue 1.10e-124

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Taxonomy

CG_Cyano_01 → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGAATCCACAGAATGCTACACTTTTTCCGATTATGGAAGCGACTGCATCTGGAGATGACGCCATCGCCGCCCTATTTAAACGCATGGCCCGTTATCCTTTACTCAAACCAAATGAAGAAATAGAACTCGCCCGTCATATTCAAAGTTTAGTTAAAATTGAAGCCCTACAAACTCAACTCACCTTAGAATTAGGACGTTTACCCACTCCCGCAGAACTCGCAACTTTAGTCGGAGTCACCGAAACCGAACTTAAACATCGTTTACAGTCGGGAAATGCCGCCAAAAATCGCATGATTAGTTCTAATTTACGCCTAGTAGTTTCTATTGCTAAACGTTATATTAATCGAGGCGTTCCCCTATTAGATTTAATACAGGAAGGAGCATTAGGACTCAACCGCGCCACGGAAAAATTTGATCCCGATAAAGGATATAAATTCTCAACCTATGCCTATTGGTGGATTCGTCAAGGAATTACCCGCACTATTGCTAATCAAGGTCGGACAATTCGCCTACCTGTTCATATTGTTGAACAGTTAAATAAAATGAAATTAAGCTATTTGGATTTAAAGCGATCGCTGCATCGAAAACCCAGCCAAGAAGAACTGGCTAAAGCCATGGGAATTAGCCCAGAACAAGTGATATTACTCGAACAAGTTCACCGCAAATCCCTGTCTTTAAATCATCGGATTGGTTCTGAGGAAACCTCAGAATTAATGGACATTTTAGAAGATCAAGAAACCCAAACTCCTGAAGCTCAAATGAATGAAATGATGATGAGACAGGACTTATTAGAGGTTTTGGGAACGGTTTTAACGGAAAGGGAAAAAGACGTTTTAGCCCTGCGATTTGGATTAGTGACGGGGGTTCCCTATACCTTAGAAGAAGTCAGTGCAGTTTATAATTTATCCCGGGAACGAGTCCGACAAATTCAAGCCCGAGCCATGCGAAAATTACGCCGTCCTCATGTTGCAGAACGTTTAAAAGGTTGGATTAGATAA
PROTEIN sequence
Length: 333
MNPQNATLFPIMEATASGDDAIAALFKRMARYPLLKPNEEIELARHIQSLVKIEALQTQLTLELGRLPTPAELATLVGVTETELKHRLQSGNAAKNRMISSNLRLVVSIAKRYINRGVPLLDLIQEGALGLNRATEKFDPDKGYKFSTYAYWWIRQGITRTIANQGRTIRLPVHIVEQLNKMKLSYLDLKRSLHRKPSQEELAKAMGISPEQVILLEQVHRKSLSLNHRIGSEETSELMDILEDQETQTPEAQMNEMMMRQDLLEVLGTVLTEREKDVLALRFGLVTGVPYTLEEVSAVYNLSRERVRQIQARAMRKLRRPHVAERLKGWIR*