ggKbase home page

cg2_3.0_scaffold_3908_c_2

Organism: CG2_30_FULL_Thiomicrospira_44_34_curated

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 2
Location: comp(330..1385)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridylate synthase (EC:4.2.1.70); K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] Tax=CG_Thiomicrospira_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 351.0
  • Bit_score: 714
  • Evalue 8.50e-203
pseudouridylate synthase (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 340.0
  • Bit_score: 523
  • Evalue 4.30e-146
tRNA pseudouridine synthase D n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=TRUD_THICR similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 340.0
  • Bit_score: 523
  • Evalue 1.50e-145
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Thiomicrospira_01 → Thiomicrospira → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
TTGAGTACATTATCTCCGTTACAAACTTTAGACTACGCCTATGGTAAGCCAGACGCAACAGCGACATTAAAAGCCGACCCAAGTGATTTTGACGTTACCGAGCAGATTGCCTATCCGTTGAGCGGGGAGGGTGAGCATCTTTGGTGCTGGGTTGAAAAGGTCGGTCAAAACACCGACTGGGTTGCCAAGCAAATGGCTAAATGGGCGGGCATTGCCCCGCGAGAAGTTGGAGTCGCGGGTAAAAAGGATCGACAAGCCATCACCCGTCAGTGGATGAGCTGTCATTTGCCTGGACAGCCGGATCCGGATATCAAAACATTAGACGTGGCCGGGGTTCAAATTTTAAAAACGGTGCGACATCACCGTAAGCTGCAAACGGGAGGGCTATCTGGAAATCGTTTTCAATTAACGCTCAGAGACGTAGCCGCAGATACAGCGGCTTTGGAAACTCGGTTGAAAAATATCGCTATTCAGGGCGTGCCGAATTATTTTGGGGAACAACGTTTTGGTCGGGATTTTCAGAATTTGCCAAAAGCAACGGCACTGTTTCAAAATCAAATTAAATCCCCCAAACGCCATCAAAAGTCTTTATATATTTCGGCTGCCCGCTCGTGGATTTTTAATGAAATTTTAAGTCAACGGGTACAACAAGCGACTTGGAATCGCGCGATTGCTGGCGATGTATTTCAACTCGAAGCCTCACAAAAATGGTTTGTTGATGATGGCTCTGAAAACCTCGCTCAGCGCGTACTTGACGGAGACCTTCATCCCACGGGTGCTTTGACGGGGCGAGGGGACTTGCCTTCAAGCGACAACGCATTTGAAATTGAGCTGTCGGTTTTACAAAAACACCCGCTTTGGCAGGCAGGGCTTGAAAAGCTGGGATTAAAGCAAGAGCGTCGTGCTTTAAGAGTATTACCCAAGAATATGAACTGGGCATGGTTAGATTCAGAAACACTTTCGGTTGAATTTGATTTGCCCGCTGGCAGTTATGCCACGATGGTAATACGGGAACTGTTTAATTTGTCGTTAGCAGACTCACTCTGTACTACCTGA
PROTEIN sequence
Length: 352
LSTLSPLQTLDYAYGKPDATATLKADPSDFDVTEQIAYPLSGEGEHLWCWVEKVGQNTDWVAKQMAKWAGIAPREVGVAGKKDRQAITRQWMSCHLPGQPDPDIKTLDVAGVQILKTVRHHRKLQTGGLSGNRFQLTLRDVAADTAALETRLKNIAIQGVPNYFGEQRFGRDFQNLPKATALFQNQIKSPKRHQKSLYISAARSWIFNEILSQRVQQATWNRAIAGDVFQLEASQKWFVDDGSENLAQRVLDGDLHPTGALTGRGDLPSSDNAFEIELSVLQKHPLWQAGLEKLGLKQERRALRVLPKNMNWAWLDSETLSVEFDLPAGSYATMVIRELFNLSLADSLCTT*