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scnpilot_expt_750_bf_scaffold_1036_2

Organism: SCNPILOT_EXPT_750_BF_Betaproteobacteria_66_21

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 5 ASCG 13 / 38
Location: 2114..2932

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit n=1 Tax=Herbaspirillum sp. YR522 RepID=J2UZA1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 259.0
  • Bit_score: 324
  • Evalue 1.00e-85
  • rbh
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EJM98606.1}; Flags: Precursor;; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Her similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 259.0
  • Bit_score: 324
  • Evalue 1.50e-85
HlyD family secretion protein similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 268.0
  • Bit_score: 309
  • Evalue 7.50e-82

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Taxonomy

Herbaspirillum sp. YR522 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
TTGCTGCCCCGCCGCGAAGCCTTCGCGCTGCTCGTCTCGCTGCCCCTGATGGCCGGCAGCGCCAGCGGGCAGGCGCAGCCGGCCGCCGCGCCCGCTTCCGCCGCGTCCGCCGTCTCCGGCGGCGGCGACGGGCGCAGCGCGCTGGAGCGCCAGGAAATCCGCGCCCAGCTCTCGCCGCGCCGCTACACCACCCTGGGCGCCGAACTCGGCGCCAAGATCAGCCGGATCGGCGTCAAGGAAGGCGAGCGCTTCAAGGCCGGCCAGGTGCTGGTCAGCTTCGACTGCTCGCTGCAGGCCGCGCAGCTGCAGCGGGCCAAGGCGACGCTGTCGGCGGCCGATCGCACGCACGGCGCGAACAGCCGGCTCGCAGAACTCAATTCCGTCGGCCGCGTCGAGCTCGACACCTCGGCCGCCGAGGTCGCCAAGGCGCGCGCCGACGTCAATCTGATGAACGCCACGCTCGCCAAGTGCAACCTGACGGCGCCGTTCGCCGGCCGCGTCGCCGAGCAGAAGGTGCGCGAACAGCAGTTCGTCCAGCCCGGGCAGGCGCTGCTCGACATCCTCGACGACAGCGCGCTGGAACTGGAATTCATCATTCCGTCCAAGTGGCTGGCCTGGCTCAAGGCCGGCACCGGCTTCAAGGTGCGCATCGACGAAACGGCGCGCGAGTACCCGGCCCGCATCACCCGCATCGGCGCCCGCGTCGATCCGGTCAGCCAGTCGGTGAAGGTCGCCGCCGTGATCGACGGCAGCTTCCCCGAACTGATCGCCGGCATGAGCGGCAAGGTCCTGCCGACGGTACCCGGCAGCGCGCCCTGA
PROTEIN sequence
Length: 273
LLPRREAFALLVSLPLMAGSASGQAQPAAAPASAASAVSGGGDGRSALERQEIRAQLSPRRYTTLGAELGAKISRIGVKEGERFKAGQVLVSFDCSLQAAQLQRAKATLSAADRTHGANSRLAELNSVGRVELDTSAAEVAKARADVNLMNATLAKCNLTAPFAGRVAEQKVREQQFVQPGQALLDILDDSALELEFIIPSKWLAWLKAGTGFKVRIDETAREYPARITRIGARVDPVSQSVKVAAVIDGSFPELIAGMSGKVLPTVPGSAP*