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scnpilot_expt_750_bf_scaffold_423_30

Organism: SCNPILOT_EXPT_750_BF_Sphingobacteriia_40_10

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(36741..37247)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingob similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 164.0
  • Bit_score: 155
  • Evalue 9.50e-35
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0003063165 similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 163.0
  • Bit_score: 155
  • Evalue 5.20e-35
shikimate kinase similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 164.0
  • Bit_score: 152
  • Evalue 1.20e-34

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Taxonomy

Pedobacter sp. BAL39 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 507
ATGAGGATTTTTCTTTTGGGGTATATGGGAACCGGAAAAACGTATTGGGGTAAGCTATGGGCTGCCCGGCATGGCATGGATTTTTTCGACCTCGATCATGAAATTGAGCGAAACGCGGGAATGACCATCCGGGAAATGTTTGAAAAACACGGAGAAAGTTTTTTCAGGGAGAAGGAGAAGGAAGCATTGTACCAGTTTAAAAATAAGAATGACTTTATTCTTTCTACCGGGGGAGGAACACCTTGCTTTTTTGATAATATGCAATGGATGAATGATAACGGAATTACAATTTATTTAAATACATCTGTTCAGGTATTGGCTGAAAGATTGACTAAAGAAAAGGACCACCGTCCTCTTATCAAAAACCTTACAAACGAAGAGCTTATACCGTTCATAGAGAACAATATAAACAAGAGAAATAAGTTTTATATACAATCAGGTGTAATTCTGAACACAGAAACGATTGCAGAAGATACATTTGAACAAATAATGAGAAAGTATGTCTAA
PROTEIN sequence
Length: 169
MRIFLLGYMGTGKTYWGKLWAARHGMDFFDLDHEIERNAGMTIREMFEKHGESFFREKEKEALYQFKNKNDFILSTGGGTPCFFDNMQWMNDNGITIYLNTSVQVLAERLTKEKDHRPLIKNLTNEELIPFIENNINKRNKFYIQSGVILNTETIAEDTFEQIMRKYV*