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scnpilot_expt_750_bf_scaffold_200_67

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 5 ASCG 14 / 38 MC: 1
Location: comp(73185..73658)

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQ03_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 158.0
  • Bit_score: 136
  • Evalue 2.30e-29
Uncharacterized protein {ECO:0000313|EMBL:AKF85318.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco similarity UNIPROT
DB: UniProtKB
  • Identity: 46.9
  • Coverage: 160.0
  • Bit_score: 143
  • Evalue 2.70e-31
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 158.0
  • Bit_score: 136
  • Evalue 6.60e-30

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Taxonomy

Myxococcus fulvus → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGACGATCGAAGCGCTGTTCTCGACGTACGTAGAGTTCGTGTGGCGCAGCCTGCGACACTTCGGAGTGCCGGAGGCGGACCTCGAAGATCAGACGCAGGAGGTCTTCCTCGTGGCCTACCGCCGCCAAGAGGAGTGCGATGTACAGCACCCGCGAGCGTGGCTCTACGGCATCGCGCGCCGCCGCGCGTCGGGATATCGACGGCGGAGTCACCTCCGTCACGAGTGTCCGGTCGAGACGCTTCCTGAACGGATCGATCCGCGCGACCTCTTCGCTCGCACGGAGATCGGGCTTCTGAGCCGCGTCTTCGCCTCGCTCGACGAGGACAAGCAAGCCGTCTTCCTCCTGTACGAGATCGAAGAGATGTCGATGCGCGAAGTCGCCGAAGCCGTCCAATGTCCCCTGAAGACCGCCTACGCCCGATACCATGCTGCGCGCCGCGAGCTCTCACGGGCGCTCGGAGAGGCGACATGA
PROTEIN sequence
Length: 158
MTIEALFSTYVEFVWRSLRHFGVPEADLEDQTQEVFLVAYRRQEECDVQHPRAWLYGIARRRASGYRRRSHLRHECPVETLPERIDPRDLFARTEIGLLSRVFASLDEDKQAVFLLYEIEEMSMREVAEAVQCPLKTAYARYHAARRELSRALGEAT*