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scnpilot_expt_750_bf_scaffold_224_18

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 5 ASCG 14 / 38 MC: 1
Location: 15311..15880

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQ03_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 169.0
  • Bit_score: 139
  • Evalue 3.30e-30
Uncharacterized protein {ECO:0000313|EMBL:AKF85318.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco similarity UNIPROT
DB: UniProtKB
  • Identity: 51.0
  • Coverage: 145.0
  • Bit_score: 142
  • Evalue 7.20e-31
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 169.0
  • Bit_score: 139
  • Evalue 9.40e-31

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Taxonomy

Myxococcus fulvus → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGGGAGTGACGTCGCTTGCGGAGTCGCTGGTCGCGGGGATACGTCGCCTCGACCAGCGTGGTGTCGAGGAGCCGACGATGACTCCGAGCGAGCTCGTCGAGAGCTTCGCGCCGTTCGTCTTGAGGACGCTGAAGTATCATTCGGTCGCGGAGCGGGATCTCGACGACGTCTGCCAAGAGGTCTTCATCATCATCTTTCGCAGGCTCCCGCAGTTCGACCCGGGGCGGCCGATCCGCGCCTGGATCTACGGGATCTGCATGAAAGTCGCCGCTGCCTACAGGCGGCGGGCTCGTCACCGGCGCGAGGTCCTCGTGCAAGAGGCTCCCGACGAGGTCGTGTCCGGCGCGTCTTCGGGCTCCGACGTCGTCTCGACCCAGCAGCTCGTCGCGATGCTCGCGCGCCTCGACGAGGACAAGCGCACGGTGCTCATCCTTCACGAGATCGAAGAGCTTCCGATGAGCGAGATCGCGCTCATCGTCGATTGCCCGGTGAAAACGGCGTACTCCCGGCTCGCCGCTGCCAGAAAGCAGATGCTGGTCATGATGTCCAAGTGGAATCCGAGGAGGTGA
PROTEIN sequence
Length: 190
MGVTSLAESLVAGIRRLDQRGVEEPTMTPSELVESFAPFVLRTLKYHSVAERDLDDVCQEVFIIIFRRLPQFDPGRPIRAWIYGICMKVAAAYRRRARHRREVLVQEAPDEVVSGASSGSDVVSTQQLVAMLARLDEDKRTVLILHEIEELPMSEIALIVDCPVKTAYSRLAAARKQMLVMMSKWNPRR*