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scnpilot_expt_750_p_scaffold_1956_4

Organism: SCNPILOT_EXPT_750_P_Bacteroidia_45_5.3_partial

near complete RP 45 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: 1684..2439

Top 3 Functional Annotations

Value Algorithm Source
transcription regulator n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5C68D similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 249.0
  • Bit_score: 197
  • Evalue 1.40e-47
Uncharacterized protein {ECO:0000313|EMBL:KKB55690.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordon similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 137.0
  • Bit_score: 104
  • Evalue 2.90e-19
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 77.0
  • Bit_score: 92
  • Evalue 2.30e-16

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Taxonomy

Parabacteroides gordonii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 756
ATGAATCAACCCGCATTAGGAAAAAAGATTGTAGAGCTTCGCAAAGCGAAGGGTTACACGCAAGAGGAACTTGTAAACAAATGCAACCTGAACATCAGGACCCTGCAGCGGATTGAATCGGGCGAAGTGGAACCCCGGAGTTATACGGTGAAAGCAATATTTGCAGCCTTGGATTATGAAGACAAGACAGACCTTACATCTCCAGAAACAGATTCCGATAGCCCCTCGATTGAGAAAAAGAATATCTTGGTCAACAACAGGATATACGCATACGTGATCGATTTATTTAATTTTAAAACTAACAAAATGAAAAAGCTTACAATCCTCACAACGCTTGTTCTGTGCATAATATTTGCGGGAACAAACTTCATGCACGCTCAAAAGCAGGAAAACACCAACCCCATGCTCGGAACCTGGATTCAATGCAATGCACAGGGAGAATCAATGTATTCCAACAACGCTGCTGAGATCAAGGTTATCACACCCGAAACGTTCACCGTGATGGTCATTGACAAAGAAAAGAAAATGTTCATGGCCGAGCTTCTGGGAACCTACACCCTTGATAAGGACACCTACACCGAAACCATCACACATTCTAATCCTCAAATCGTTGGCTATACGGGCAGAGTGAATATTTTCAAGATCACCTTCAAAGGCGATTTGCTCATATTGGAAGGGCAAAACAACACCTACAACCAGACATGGAAAAGGATAAACCCCGAAGAGCTGAAGGTGGTAAACTCAGAGAAAAAATAG
PROTEIN sequence
Length: 252
MNQPALGKKIVELRKAKGYTQEELVNKCNLNIRTLQRIESGEVEPRSYTVKAIFAALDYEDKTDLTSPETDSDSPSIEKKNILVNNRIYAYVIDLFNFKTNKMKKLTILTTLVLCIIFAGTNFMHAQKQENTNPMLGTWIQCNAQGESMYSNNAAEIKVITPETFTVMVIDKEKKMFMAELLGTYTLDKDTYTETITHSNPQIVGYTGRVNIFKITFKGDLLILEGQNNTYNQTWKRINPEELKVVNSEKK*