ggKbase home page

scnpilot_expt_750_p_scaffold_2798_7

Organism: SCNPILOT_EXPT_750_P_Bacteroidia_45_5.3_partial

near complete RP 45 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: comp(6249..6740)

Top 3 Functional Annotations

Value Algorithm Source
DNA mismatch endonuclease Vsr n=1 Tax=Porphyromonas gingivalis W4087 RepID=U2K132_PORGN similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 159.0
  • Bit_score: 181
  • Evalue 6.60e-43
DNA mismatch endonuclease Vsr {ECO:0000313|EMBL:EOS19080.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 162.0
  • Bit_score: 168
  • Evalue 1.10e-38
vsr; DNA mismatch endonuclease Vsr similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 151.0
  • Bit_score: 166
  • Evalue 4.70e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parabacteroides goldsteinii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 492
ATGTCCAAAATCCGGTCGAAGAACACGAAGCCAGAGGTGAAGCTTCGCAAGGCTCTCTTTGCTCAAGGTTTTCGCTACCGCATCAACGATAAAAAGATCGCCGGATCGCCCGACATTGTTTTCCCAAAATACAAAACCGTCATATTTGTACAAGGATGTTTCTGGCACGGACACGAAAACTGCAAACTATCGCACCTCCCGAAATCGAACGTGGAATTTTGGAGAAGCAAGATGGAGAGAAATAAGAAGCGCGACAAGCAGATCAAATACCAATTGATTGTTTCCGGTTGGAAAGTGATTGAAGTGTGGGAATGCGAAATAAAGACGAAACTGAGGCTCAAGCGCACGGTGGATAAAATCGCAAGTTGGCTCAGAGGGTTGGATAAACCACCCACAAAGCGCCGTGTGCATGTGCAACTCTACGACGAATTTGAAGACGATGTGAAAATTGTGGCGGAGGATGAAATTGCCTACCCAAAGCTGAAGCAATGA
PROTEIN sequence
Length: 164
MSKIRSKNTKPEVKLRKALFAQGFRYRINDKKIAGSPDIVFPKYKTVIFVQGCFWHGHENCKLSHLPKSNVEFWRSKMERNKKRDKQIKYQLIVSGWKVIEVWECEIKTKLRLKRTVDKIASWLRGLDKPPTKRRVHVQLYDEFEDDVKIVAEDEIAYPKLKQ*