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scnpilot_expt_750_p_scaffold_3620_2

Organism: SCNPILOT_EXPT_750_P_Bacteroidia_45_5.3_partial

near complete RP 45 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: 2549..3469

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Alistipes senegalensis RepID=UPI00031B89C5 similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 293.0
  • Bit_score: 379
  • Evalue 4.00e-102
  • rbh
HTH domain protein similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 297.0
  • Bit_score: 438
  • Evalue 1.60e-120
HTH domain protein {ECO:0000313|EMBL:CEA16232.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromon similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 297.0
  • Bit_score: 438
  • Evalue 7.80e-120

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Taxonomy

Porphyromonadaceae bacterium ING2-E5B → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 921
ATGATAATTATGGATCAACCTAAACTCGAACGCTTACTCCGGTTAATGAAAATGCTCACAGCCAATAACTCATTAACCGTTGATGAAATTGCCGACAAACTGGCTATTTCGTCTCGCTCTGTTTATCGCTACATCGACACTTTTCGGGATGCTGGATTTGTCATTAAAAAGACGAACAATTGCCCAAAGCTCGACAAATCTTCACCCTACTTCAAGGATATTAGCGAGCTGATTCATTTCACCGAAGAAGAGGCCTTTATCCTCAAATCGGCTATTGAGAATATTGACGAAAACAACCTACTCAAACAAAACCTCAAGAAGAAGCTCTACACCGTTTATGACTACAACATTCTGGCCGAAACCATTGTCAGTGGCAAAAACGGGCGAAATGTCGGACAGTTGGTGCAAGCCATAGAGAACAAAAAGAGGGTTGTGTTGAAAAACTATTCCTCGGCTCACGGCAACGATGTTCGGGACAGGGTAGTCGAGGCTTATGCGTTTACCACCAATTACGTGCAGGTGTGGTGCTATTGCCCCGAAGAAAACCAAAACAAACTCTTCAAAATATCAAGAATTGGGAGTGTGGACATACTGCCCGAAGCCTGGCAACACGAAGCTCAACACCAATCCGGCTATATCGACGTGTTCCGCATGAACAGCAAGGAAACCAAACCCGTGAAGCTCAGATTGGGTTTGCGTGCAGCGAATCTTCTATCGGAAGAATTTCCCTTGGCTTCAAAATACCTCAACAAATTATCCGATAACGAATGGGTATTTGAATCCGAAGTTTGTTCTTACGATGGCGTGGGTCGTTTTGTAATGGGATTGCTGGATGATATTGAAATTATCGAATCGCCTGAACTTCAGAAATACATTGCCGACCACCTGAAAAACGCTCAAAATAAATTCCCATTGTCATAA
PROTEIN sequence
Length: 307
MIIMDQPKLERLLRLMKMLTANNSLTVDEIADKLAISSRSVYRYIDTFRDAGFVIKKTNNCPKLDKSSPYFKDISELIHFTEEEAFILKSAIENIDENNLLKQNLKKKLYTVYDYNILAETIVSGKNGRNVGQLVQAIENKKRVVLKNYSSAHGNDVRDRVVEAYAFTTNYVQVWCYCPEENQNKLFKISRIGSVDILPEAWQHEAQHQSGYIDVFRMNSKETKPVKLRLGLRAANLLSEEFPLASKYLNKLSDNEWVFESEVCSYDGVGRFVMGLLDDIEIIESPELQKYIADHLKNAQNKFPLS*