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scnpilot_expt_750_p_scaffold_3329_6

Organism: SCNPILOT_EXPT_750_P_Bacteroidia_45_5.3_partial

near complete RP 45 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: 4590..5114

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J0K7_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 173.0
  • Bit_score: 193
  • Evalue 1.80e-46
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgono similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 173.0
  • Bit_score: 193
  • Evalue 2.50e-46
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 174.0
  • Bit_score: 163
  • Evalue 5.60e-38

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Taxonomy

Dysgonomonas gadei → Dysgonomonas → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 525
ATGATTGCCCGCGAAGAGGTTTTCAGCATCGGGCGTTTCATGAAGCCCCACGGTGTGAAGGGCGAAATCGCACTAAACCTGCACAACGACGTCTTTGCACAAGGCGAGTATCCCTATCTGGTGTGCGACATAGAAGGCATCCTGGTGCCGTTTTTTGTTTCTTCCTTCCGCTACAAGGGAACGAATACCGGTTTGGTGCGTTTCGAGGGGGTGGACGACGAAAAGCAAGCACATCGCTTCGACGGCATAGAAGCCTATCTTCACCGCTCGCTTTTCAAAGGTGAGGAGATGGAGGGTGAAGATTATTCCTGGAATTTCTTCGTGGGATTCACCGTCATCGATGCCCAATATGGCGAAATAGGGGTGATCGAGGACGTGGATGACGACACGGCCAATGTGTTGTTCATCATCCGCTCCGCTGAAGGAGACGAGGTACTGATTCCTGCCGCCGAAGATCTCATCGAGGGTTTTGACGAGGAAGCCCAGGTGTTGCACACCCAACTTCCCGAAGGCTTATTCGACTAA
PROTEIN sequence
Length: 175
MIAREEVFSIGRFMKPHGVKGEIALNLHNDVFAQGEYPYLVCDIEGILVPFFVSSFRYKGTNTGLVRFEGVDDEKQAHRFDGIEAYLHRSLFKGEEMEGEDYSWNFFVGFTVIDAQYGEIGVIEDVDDDTANVLFIIRSAEGDEVLIPAAEDLIEGFDEEAQVLHTQLPEGLFD*