ggKbase home page

scnpilot_expt_750_p_scaffold_10522_3

Organism: SCNPILOT_EXPT_750_P_Bacteroidia_45_5.3_partial

near complete RP 45 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: 2358..3146

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T076_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 263.0
  • Bit_score: 399
  • Evalue 3.20e-108
  • rbh
xylose isomerase domain-containing protein tim barrel similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 263.0
  • Bit_score: 399
  • Evalue 9.10e-109
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:ADQ78266.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 263.0
  • Bit_score: 399
  • Evalue 4.50e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 789
ATGCCAACATTTGGAACTTCCCTGCTGTCGTTCATTCCCGGATGGAGTGCCGATAAAGGATTGTACGCTATTCAACAAACAGCCGCTTACGGATTCGACATGCTCGAAATATGCTTGCCTGGCACGCTCGATTTCGATGCGAAAACAGTGAAAAAACAATTGGATGACCATGGGGTGGGGGTGCGCCTTTCACTCAATGTGCCCCCCGAATGCCACATCCCGTTTTATCCTCAGAAAGCAACCGACGTACTAAAAAAAGCGGTGGATTTGGCCGCCGAAGTGGGGAGCGATTTTCTGGGAGGTGTGCTGCATTCGTCTATCGGTACATTCACCGGCCAGCCTTTGACTGTGGCCGAAAAGGCCACTCTTTACGGTGTGTTTGCAGATGTTGCTGCCCATGCGAAGTTGTGTGGTATCATCGTTGCTCCGGAGCCAATCAACCGCTACGAAAGCTATGTGTTCACGGCTGCGGAAGAAGTGTTATCCATGATTGGCACCATCGGTGCAGATACTATCGGGTTGCATCTCGACACATTTCACATGAACATCGAAGAGGCTAATTTTTACGACCCCGTAGTGAAAGCGGGAGACTGCCTCAAGCATCTGCATGTAACCGAAAGCGACCGCGGCATGACGGGCGAAGGCAATGTGCATTGGGACGATTTGTTCCGGGGGCTGGCCGAGATTGATTACCAAGGTCCACTGGTATTGGAAAATTTTTCGTCTGAAATCACGGAGCTTGTAGGTCCTACGTCTATGTGGCGGCCATCCAAATACAACTCTGAGGAT
PROTEIN sequence
Length: 263
MPTFGTSLLSFIPGWSADKGLYAIQQTAAYGFDMLEICLPGTLDFDAKTVKKQLDDHGVGVRLSLNVPPECHIPFYPQKATDVLKKAVDLAAEVGSDFLGGVLHSSIGTFTGQPLTVAEKATLYGVFADVAAHAKLCGIIVAPEPINRYESYVFTAAEEVLSMIGTIGADTIGLHLDTFHMNIEEANFYDPVVKAGDCLKHLHVTESDRGMTGEGNVHWDDLFRGLAEIDYQGPLVLENFSSEITELVGPTSMWRPSKYNSED