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scnpilot_expt_750_p_scaffold_9640_1

Organism: SCNPILOT_EXPT_750_P_Bacteroidia_45_5.3_partial

near complete RP 45 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: 2..493

Top 3 Functional Annotations

Value Algorithm Source
SusD family protein n=1 Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QSW0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 169.0
  • Bit_score: 133
  • Evalue 2.70e-28
Outer membrane protein {ECO:0000313|EMBL:GAO30832.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.; similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 158.0
  • Bit_score: 139
  • Evalue 4.00e-30
RagB/SusD family protein similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 167.0
  • Bit_score: 132
  • Evalue 1.30e-28

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Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 492
ACTTATCTTTACCGCACCAACACATCCAACTGGATTATCTACCGCTTATCGGATGTGATGCTGATGAAAGCAGAAGCGTTGGTGGAGATCAACAACAAGCTTATCGATCTCACTCCCAATCTCCCGAACTACAAGGCTGCCTTGGAATTGGTGAACACCGTTTACAAACGCTCGAATGCGGAAGCCGCGGATCTGGATATTGCCAACTATCCCACTCTCAGCGATAAGCGTAATTTGGTGATGCGCGAACGTCAGAGGGAGCTCCTTTTCGAGGGAAAGCGCTGGTTCGACTTGCTTCGCATGGCCCGCAGGGATGGCAACACGAGCAACATCAATGACTACATGGATCGCAAAGCTTCTGGTGCCACTTCTTCGCTTGGAGTGCCTGTGCTTGATGCCTTGTACTTCCCGATTAGCGATGGCGACTTGAAGACCAATGCCAAGTTGGTTCAGAATCCTTATTACAAGACGACCTCGTCTTCAAACAGATAA
PROTEIN sequence
Length: 164
TYLYRTNTSNWIIYRLSDVMLMKAEALVEINNKLIDLTPNLPNYKAALELVNTVYKRSNAEAADLDIANYPTLSDKRNLVMRERQRELLFEGKRWFDLLRMARRDGNTSNINDYMDRKASGATSSLGVPVLDALYFPISDGDLKTNAKLVQNPYYKTTSSSNR*