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scnpilot_expt_750_p_scaffold_17535_2

Organism: SCNPILOT_EXPT_750_P_Bacteroidia_45_5.3_partial

near complete RP 45 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: 1633..2199

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=2 Tax=Alicycliphilus denitrificans RepID=E8U1E1_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 189.0
  • Bit_score: 336
  • Evalue 1.40e-89
RNA polymerase sigma-32 subunit RpoH similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 189.0
  • Bit_score: 336
  • Evalue 4.00e-90
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 189.0
  • Bit_score: 336
  • Evalue 2.00e-89

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGGCCGCTGTCTCCGCTCCCGCCGCGACCGCCCTGGCGCCTGCCAATCCCTGGGCGCTGGTGCCCCCGCTGGGCAACCTCGACGCCTACATCTCGGCCGTCAACCGGCTGCCACTACTCACCCCCGAGGAAGAGCAGGACTACGCGCGCCGCCTCAAGGAGCACAACGACCTGGACGCGGCCGGGCGCCTGGTGATGTCGCACCTGCGCCTGGTGGTGTCGATCTCGCGCCAGTACCTGGGCTACGGCCTGCCGCAGGGCGACCTGATCCAGGAAGGCAACGTGGGGCTGATGAAGGCCGTCAAGCGCTTCGACCCCGACCAGGGCGTGCGCCTGGTGAGCTACGCCATGCACTGGATCAAGGCCGAGATCCACGAATACATCCTGAAGAACTGGCGCATGGTCAAGGTGGCCACCACCAAGGCGCAGCGCAAGCTGTTCTTCAACCTGCGCTCGATGAAGCAGGGCTTCAAGGCCGAGGCGCTGGACGCCGGTGCGCACCGCGAGAGCCTGTCGGAGCACGAGATCGACCTGGTGGCCGAGCAGCTCAACGTCAAGCGCGAGGAA
PROTEIN sequence
Length: 189
MAAVSAPAATALAPANPWALVPPLGNLDAYISAVNRLPLLTPEEEQDYARRLKEHNDLDAAGRLVMSHLRLVVSISRQYLGYGLPQGDLIQEGNVGLMKAVKRFDPDQGVRLVSYAMHWIKAEIHEYILKNWRMVKVATTKAQRKLFFNLRSMKQGFKAEALDAGAHRESLSEHEIDLVAEQLNVKREE