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scnpilot_expt_750_p_scaffold_16664_1

Organism: SCNPILOT_EXPT_750_P_Bacteroidia_45_5.3_partial

near complete RP 45 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: 3..791

Top 3 Functional Annotations

Value Algorithm Source
Probable cell surface protein (Leucine-rich repeat protein) n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GW09_FLAPJ similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 260.0
  • Bit_score: 243
  • Evalue 2.30e-61
cell surface protein similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 297.0
  • Bit_score: 245
  • Evalue 1.70e-62
Flavobacterium repeat protein {ECO:0000313|EMBL:AIJ36689.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 263.0
  • Bit_score: 238
  • Evalue 1.30e-59

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Taxonomy

Flavobacterium psychrophilum → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 789
GCGGTTACGATACCAGCCCAGGTAACCAATGGAGCTAACACCTACAATGTGACGGGTATTGGCAATAATGCTTTTCAAAATTCCAGTGGTTTAACCTCGGTTACTATTCCCAACTCAGTTACCAGTATTGGGGTTTATGCTTTTACAAACTGCACGAATTTGACATCATTAGCTATTCCCAGCTCGGTTACCAGTATCGGGCAGAATACCTTTAACAGTTGTACTGGTTTAACATCGGTAAGCATTCCCAATGGTATTACAAGTATTGAGCAAGGTAGTTTTTACAATTGTAGCAGTTTAACTTCTGTAACCATACCCGGATCGGTAACAAGTATTGGTGGATCTGCTTTTTATCAGTGCAGCAGGTTAACTTCGGTTACCATCCCTAACTCGGTTACGAGTATTGGTAATAGTGCTTTTTCTGGTTGTAGCGGGTTAACTTCGGTTACGCTTCCCGGCTCTGTTACGAGTATTGCTAGTTATGCTTTTTCATCCTGCACGAGCTTAACTTCGATAAGTATCCCCAGCTCTGTTACAAGTATGGGCGATTATTTTTTGTACGATTGTACGGCTTTACAATCTGTTTTCGCAAACTGGACATCGCCTCCTGCTATTAATACCAGTGTATTGTTTCATTTGTTTTTATCCAGTGTATGTTTGTATGTACCGGCAGGTACAACTGCTGCGTATAGCGGTGCTGCTGTTTGGAGTGGGTTTAATATTAAATCCCAAACCTTTAGCGATGAGGTATCAACTATACAACTACTTCTGCTACTACCGTACAAGTAG
PROTEIN sequence
Length: 263
AVTIPAQVTNGANTYNVTGIGNNAFQNSSGLTSVTIPNSVTSIGVYAFTNCTNLTSLAIPSSVTSIGQNTFNSCTGLTSVSIPNGITSIEQGSFYNCSSLTSVTIPGSVTSIGGSAFYQCSRLTSVTIPNSVTSIGNSAFSGCSGLTSVTLPGSVTSIASYAFSSCTSLTSISIPSSVTSMGDYFLYDCTALQSVFANWTSPPAINTSVLFHLFLSSVCLYVPAGTTAAYSGAAVWSGFNIKSQTFSDEVSTIQLLLLLPYK*