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scnpilot_expt_750_p_scaffold_36132_1

Organism: SCNPILOT_EXPT_750_P_Bacteroidia_45_5.3_partial

near complete RP 45 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: comp(1..1401)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 467.0
  • Bit_score: 825
  • Evalue 4.50e-236
DNA-directed RNA polymerase subunit beta n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J004_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 467.0
  • Bit_score: 825
  • Evalue 3.20e-236
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 467.0
  • Bit_score: 779
  • Evalue 7.50e-223

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Taxonomy

Dysgonomonas gadei → Dysgonomonas → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1401
TCCATCGCTGCTTCCTTGATTCCTTTCTTGGAACATGATGACGCCAACCGTGCATTGATGGGTTCAAACATGATGCGCCAAGCGGTGCCATTGCTCCGCACGGAAGCTCCTATCATCGGGACTGGCATCGAAGGGCAGTTGATCCGCGATTCCCGCACCCAGATCGTGGCGGAAAGAGCCGGTGAAATTGTGTATGTGGATGCAAGTACCATTAAAATCAAATACGACCGGACAGATGACGAGGAGTTTGTAAGTTTCGACAGTTCTGTGAAAACTTATATTATCCCGAAATTTAGAAAGACGAACCAAAATACAACCATCGACCTTCGTCCTACTTGCAAGAAAGGACAGCGCGTGGAAGGCGGGGAGATCCTGACAGAAGGATATTCCACTGAAAACGGAGAGTTGGCGATTGGCAAAAACCTGAAAGTGGCCTTCATGCCCTGGAAGGGATACAACTACGAAGATGCCATTGTGTTGAACGAACGAATTGTTCGTGACGACATCCTGACTTCGGTGCATGTCGAAGAGTTTTCTCTCGAAGTCCGCGAAACAAAACGGGGTGTGGAAGAATTGACTTCCGACATTCCCAACGTGAGCGAAGATGCGACGAAAGATTTGGACGAGCGTGGCATTGTCCGTATCGGAGCGAAAGTGGGTCCGGGCGACATCCTGATCGGTAAAATCACTCCTAAAGGTGAATCTGACCCTTCTCCAGAAGAAAAATTATTGAGAGCCATCTTCGGTGATAAAGCCGGTGATGTGAAGGATGCTTCGTTGAAAGCTTCTCCTTCTTTGAAAGGGGTCGTTGTAGGCACTCATTTGTTCTCCAAAGCCAATAAGAAAGGCAAGACCAAACTTTCGAGCAAGGCTTTGCTTCCGAAATTGGATGAGGAATATGAAGTGAAAATGGGTGAATTGAAATCCCTGTTGGTGGATAAAATTTTGGTGCTCACAGACGGAAAACTGTCGCAGGGCGTGAAAGATTACCTCAATGTGGATGTAATTCCCAAAGGCGTTAAGTTTACTAAGGCTGCTTTGGATGCTATCGACTACGAATCCATCCAAGTCAGCAAATGGACACCCGATGCTCATAAAAACGACTTGATCCGCGATGTGATTGTCAATTATCTCCGTAAATACAAGGAATTGGATGCCGAGTTGAAACGCAAGCGTTTTGACCTGACCATCGGAGACGAACTTCCATCCGGAATTATCCAGATAGCAAAGGTTTACGTTGCAAAGAAACGTAAGATCCAGGTAGGGGACAAGATGGCCGGTCGTCACGGGAACAAGGGGATCGTTTCCCGGATTGTCCGCGACGAAGATATGCCTTTCTTGTCTGACGGTACTCCAGTGGATATTGTCCTGAACCCGTTGGGTGTGCCTTCGCGTATGAAC
PROTEIN sequence
Length: 467
SIAASLIPFLEHDDANRALMGSNMMRQAVPLLRTEAPIIGTGIEGQLIRDSRTQIVAERAGEIVYVDASTIKIKYDRTDDEEFVSFDSSVKTYIIPKFRKTNQNTTIDLRPTCKKGQRVEGGEILTEGYSTENGELAIGKNLKVAFMPWKGYNYEDAIVLNERIVRDDILTSVHVEEFSLEVRETKRGVEELTSDIPNVSEDATKDLDERGIVRIGAKVGPGDILIGKITPKGESDPSPEEKLLRAIFGDKAGDVKDASLKASPSLKGVVVGTHLFSKANKKGKTKLSSKALLPKLDEEYEVKMGELKSLLVDKILVLTDGKLSQGVKDYLNVDVIPKGVKFTKAALDAIDYESIQVSKWTPDAHKNDLIRDVIVNYLRKYKELDAELKRKRFDLTIGDELPSGIIQIAKVYVAKKRKIQVGDKMAGRHGNKGIVSRIVRDEDMPFLSDGTPVDIVLNPLGVPSRMN