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scnpilot_expt_750_p_scaffold_35385_1

Organism: SCNPILOT_EXPT_750_P_Bacteroidia_45_5.3_partial

near complete RP 45 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: 3..299

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Odoribacter RepID=F9Z6C6_ODOSD similarity UNIREF
DB: UNIREF100
  • Identity: 48.7
  • Coverage: 76.0
  • Bit_score: 82
  • Evalue 3.30e-13
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 76.0
  • Bit_score: 82
  • Evalue 9.20e-14
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:KKB59426.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Par similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 75.0
  • Bit_score: 82
  • Evalue 4.60e-13

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Taxonomy

Parabacteroides goldsteinii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 297
AGGTCGCCTCATTCGAACCGAAAGGCCGGAAATTGGGTTGATGAAAACTTGATGAAACGTTTCCTGTCGGACGACAACGCTGAAAGCCAACTGATGAATGCCGATCTGGCAAAGCTTATCCAAATGGCAACGGAAAGCCTGACCCCGAAACAAAAACTGGTGTTCACCCTCCGCTACCTAGAGGAGATGGAGATGGACGAAATAGCGGAAATAAGCGGAATGACCACCGACCAGATAAAGAGCAACTTATACCTTGCACGAAATCAAATGCAAGAAAAATTGAAAAGAATAGTATGA
PROTEIN sequence
Length: 99
RSPHSNRKAGNWVDENLMKRFLSDDNAESQLMNADLAKLIQMATESLTPKQKLVFTLRYLEEMEMDEIAEISGMTTDQIKSNLYLARNQMQEKLKRIV*