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SCNPILOT_EXPT_750_P_Bacteroidia_45_5.3_partial

SCNPILOT_EXPT_750_P_Bacteroidales_45_6
In projects: SCNPILOT_EXPT_750_P  |  SCN_92

Consensus taxonomy: Bacteroidales  →  Bacteroidia  →  Bacteroidetes  →  Bacteria

Description

highly fragmented

Displaying items 451-500 of 907 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_expt_750_p_scaffold_5157
Class: Bacteroidia (66.67%)
3 5753 bp 48.84 6.26 95.38
scnpilot_expt_750_p_scaffold_24637
Species: Dysgonomonas mossii (66.67%)
3 1773 bp 44.78 4.23 87.14
scnpilot_expt_750_p_scaffold_10208
Order: Bacteroidales (100%)
3 3218 bp 46.08 5.13 81.01
scnpilot_expt_750_p_scaffold_7882
Species: Bacteroides salyersiae (66.67%)
3 3959 bp 45.34 6.95 85.78
scnpilot_expt_750_p_scaffold_24901
Species: Dysgonomonas gadei (100%)
3 1760 bp 47.33 4.26 91.88
scnpilot_expt_750_p_scaffold_16294
Species: Alistipes sp. 627 (66.67%)
3 2320 bp 48.23 4.74 81.59
scnpilot_expt_750_p_scaffold_13950
Order: Bacteroidales (66.67%)
3 2573 bp 48.66 5.44 89.78
scnpilot_expt_750_p_scaffold_10726
Order: Bacteroidales (66.67%)
3 3102 bp 45.04 5.72 79.11
scnpilot_expt_750_p_scaffold_15104
Genus: Bacteroides (66.67%)
3 2438 bp 42.17 5.95 93.15
scnpilot_expt_750_p_scaffold_7635
Species: Paludibacter propionicigenes (100%)
3 4062 bp 49.83 5.85 95.49
scnpilot_expt_750_p_scaffold_7893
Order: Bacteroidales (66.67%)
3 3952 bp 48.76 6.20 97.70
scnpilot_expt_750_p_scaffold_23951
Genus: Dysgonomonas (66.67%)
3 1803 bp 45.48 5.27 89.52
scnpilot_expt_750_p_scaffold_27968
Genus: Bacteroides (66.67%)
3 1637 bp 47.65 5.35 77.89
scnpilot_expt_750_p_scaffold_35385
Order: Bacteroidales (66.67%)
3 1419 bp 44.12 3.17 100.42
scnpilot_expt_750_p_scaffold_20858
Species: Paludibacter propionicigenes (66.67%)
3 1969 bp 45.00 4.06 77.86
scnpilot_expt_750_p_scaffold_11068
Species: Paludibacter propionicigenes (66.67%)
3 3042 bp 43.59 5.75 81.16
scnpilot_expt_750_p_scaffold_14291
Order: Bacteroidales (66.67%)
3 2531 bp 48.95 5.73 98.74
scnpilot_expt_750_p_scaffold_8750
Species: Dysgonomonas gadei (66.67%)
3 3636 bp 45.90 5.09 90.59
scnpilot_expt_750_p_scaffold_15385
Order: Bacteroidales (100%)
3 2406 bp 48.34 3.64 99.13
scnpilot_expt_750_p_scaffold_55068
Species: Parabacteroides goldsteinii (66.67%)
3 1092 bp 46.06 5.95 101.10
scnpilot_expt_750_p_scaffold_26948
Order: Bacteroidales (66.67%)
3 1676 bp 38.19 7.31 83.05
scnpilot_expt_750_p_scaffold_16330
Genus: Odoribacter (66.67%)
3 2316 bp 46.93 5.40 51.81
scnpilot_expt_750_p_scaffold_44027
Order: Bacteroidales (66.67%)
3 1246 bp 33.31 2.01 93.18
scnpilot_expt_750_p_scaffold_6325
Genus: Dysgonomonas (66.67%)
3 4755 bp 48.48 4.78 90.98
scnpilot_expt_750_p_scaffold_17245
Order: Bacteroidales (66.67%)
3 2228 bp 47.17 5.16 94.66
scnpilot_expt_750_p_scaffold_5206
Species: Dysgonomonas gadei (100%)
3 5709 bp 47.82 5.96 96.43
scnpilot_expt_750_p_scaffold_8510
Species: Dysgonomonas gadei (66.67%)
3 3715 bp 49.18 5.72 92.95
scnpilot_expt_750_p_scaffold_6582
Species: Dysgonomonas gadei (66.67%)
3 4596 bp 45.87 5.28 98.96
scnpilot_expt_750_p_scaffold_23476
Species: Dysgonomonas mossii (66.67%)
3 1825 bp 48.11 4.66 91.07
scnpilot_expt_750_p_scaffold_18501
Genus: Bacteroides (66.67%)
3 2123 bp 47.81 4.59 83.80
scnpilot_expt_750_p_scaffold_24698
Genus: Parabacteroides (100%)
3 1770 bp 48.98 8.05 95.76
scnpilot_expt_750_p_scaffold_10522
Species: Paludibacter propionicigenes (100%)
3 3147 bp 49.22 5.48 94.76
scnpilot_expt_750_p_scaffold_23483
Species: Dysgonomonas gadei (66.67%)
3 1825 bp 43.29 3.70 83.67
scnpilot_expt_750_p_scaffold_22397
Species: Dysgonomonas gadei (100%)
3 1882 bp 49.63 5.05 92.77
scnpilot_expt_750_p_scaffold_21453
Order: Bacteroidales (66.67%)
3 1935 bp 43.31 6.85 81.40
scnpilot_expt_750_p_scaffold_32438
Species: Paludibacter propionicigenes (66.67%)
3 2806 bp 42.94 5.43 90.13
scnpilot_expt_750_p_scaffold_13501
Species: Dysgonomonas mossii (66.67%)
3 2632 bp 43.81 6.27 59.04
scnpilot_expt_750_p_scaffold_38805
Genus: Bacteroides (66.67%)
3 1343 bp 42.52 5.40 65.67
scnpilot_expt_750_p_scaffold_21462
Species: Dysgonomonas mossii (66.67%)
3 1935 bp 44.03 5.17 84.81
scnpilot_expt_750_p_scaffold_8535
Species: Dysgonomonas gadei (66.67%)
3 3709 bp 48.48 5.66 93.99
scnpilot_expt_750_p_scaffold_10023
Genus: Dysgonomonas (66.67%)
3 3272 bp 46.85 5.96 81.14
scnpilot_expt_750_p_scaffold_14849
Order: Bacteroidales (66.67%)
3 2465 bp 44.99 4.06 91.64
scnpilot_expt_750_p_scaffold_10793
Order: Bacteroidales (100%)
3 3089 bp 47.72 6.23 89.25
scnpilot_expt_750_p_scaffold_26220
Order: Bacteroidales (66.67%)
3 1703 bp 41.57 4.40 81.39
scnpilot_expt_750_p_scaffold_9840
Genus: Dysgonomonas (66.67%)
3 3313 bp 47.75 5.28 94.08
scnpilot_expt_750_p_scaffold_5245
Phylum: Bacteroidetes (100%)
3 5659 bp 44.87 5.88 95.53
scnpilot_expt_750_p_scaffold_10808
Species: Bacteroides vulgatus (66.67%)
3 3085 bp 44.47 6.16 85.19
scnpilot_expt_750_p_scaffold_9594
Genus: Bacteroides (66.67%)
3 3385 bp 48.12 4.14 87.92
scnpilot_expt_750_p_scaffold_27275
Species: Dysgonomonas gadei (66.67%)
3 1663 bp 41.01 4.51 74.32
scnpilot_expt_750_p_scaffold_25692
Species: Dysgonomonas gadei (100%)
3 1725 bp 46.38 6.67 81.74
Displaying items 451-500 of 907 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.