ggKbase home page

BD02T64_scaffold_111

Search features with annotation key words

Displaying items 121-141 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_111_121
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

127347..128105
-----------------
DNA (759bp)
protein (253aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium BDW918 RepID=I2JG68_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIF41970.1}; TaxID=1168065 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
hypothetical protein
BD02T64_scaffold_111_122
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128211..131729
-----------------
DNA (3519bp)
protein (1173aa)
Signal transduction histidine kinase n=1 Tax=Cycloclasticus sp. (strain P1) RepID=K0C5Z8_CYCSP
Signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AFT67131.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="C
BD02T64_scaffold_111_123
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131738..132049
-----------------
DNA (312bp)
protein (104aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI00039B5A87
Transporter {ECO:0000313|EMBL:KJS04284.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
BD02T64_scaffold_111_124
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132076..133731)
-----------------
DNA (1656bp)
protein (552aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI000381F6D5 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS09839.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
BD02T64_scaffold_111_125
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133844..135052)
-----------------
DNA (1209bp)
protein (403aa)
membrane protein n=1 Tax=Pseudomonas pelagia RepID=UPI00039A8E54
Flavoprotein {ECO:0000313|EMBL:CEA03540.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 12M76_air.;"
flavoprotein
BD02T64_scaffold_111_126
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135216..135791
-----------------
DNA (576bp)
protein (192aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKC5_METPP
Pyridoxamine 5'-phosphate oxidase, FMN-binding family {ECO:0000313|EMBL:EWS54766.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methyl
hypothetical protein
BD02T64_scaffold_111_127

Not on your lists

135970..136773
-----------------
DNA (804bp)
protein (268aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI0002EFAD3E
Putative uncharacterized protein {ECO:0000313|EMBL:CBI71175.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative Fe-S protein
BD02T64_scaffold_111_128
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136893..138434
-----------------
DNA (1542bp)
protein (514aa)
Anaerobic nitric oxide reductase transcription regulator n=2 Tax=Pseudomonas RepID=F8FUJ2_PSEPU
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIN62021.1}; TaxID=1388763 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mos
BD02T64_scaffold_111_129
Cellulophaga geojensis, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

138643..140319
-----------------
DNA (1677bp)
protein (559aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1328323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cel
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RGM4_CELLC
integral membrane sensor signal transduction histidine kinase
BD02T64_scaffold_111_130
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140312..140743
-----------------
DNA (432bp)
protein (144aa)
Two-component system response regulator n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KDU5_9GAMM rbh
Two-component system response regulator {ECO:0000313|EMBL:EGG99459.1}; TaxID=434085 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium IMCC2047.;"
response regulator receiver
BD02T64_scaffold_111_131
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140774..142483
-----------------
DNA (1710bp)
protein (570aa)
Sensory box/GGDEF family protein n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KDU4_9GAMM
Sensory box/GGDEF family protein {ECO:0000313|EMBL:EGG99458.1}; TaxID=434085 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium IMCC2047.;"
GGDEF domain-containing protein
BD02T64_scaffold_111_132
Pseudoalteromonas atlantica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142881..144725
-----------------
DNA (1845bp)
protein (615aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidi
Phosphomethylpyrimidine synthase n=1 Tax=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) RepID=Q15UI9_PSEA6 rbh
thiamine biosynthesis protein ThiC
BD02T64_scaffold_111_133
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

144740..145747
-----------------
DNA (1008bp)
protein (336aa)
thiamine biosynthesis protein thio n=1 Tax=Xanthobacteraceae RepID=UPI00035DACDA rbh
glycine oxidase ThiO
Glycine oxidase ThiO {ECO:0000313|EMBL:ADH89898.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya
BD02T64_scaffold_111_134
Acetobacter pasteurianus, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145731..145928
-----------------
DNA (198bp)
protein (66aa)
Thiamine biosynthesis protein ThiS n=2 Tax=Sulfitobacter RepID=A3SD71_9RHOB
thiS; thiamine biosynthesis protein ThiS
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:GAB29939.1}; TaxID=940265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetob
BD02T64_scaffold_111_135
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145928..146746
-----------------
DNA (819bp)
protein (273aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae;
thiazole synthase n=1 Tax=Kiloniella laminariae RepID=UPI0003656511
thiazole biosynthesis family protein
BD02T64_scaffold_111_136
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146743..147381
-----------------
DNA (639bp)
protein (213aa)
Thiamine-phosphate synthase {ECO:0000256|RuleBase:RU003826}; EC=2.5.1.3 {ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|RuleBase:RU003826}; TaxID=1231190 species="B
Thiamine-phosphate synthase n=1 Tax=Nitratireductor indicus C115 RepID=K2P6U8_9RHIZ rbh
thiEb; thiamine-phosphate pyrophosphorylase
BD02T64_scaffold_111_137
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

147394..148365
-----------------
DNA (972bp)
protein (324aa)
Thiamine biosynthesis protein ThiF n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZU6_9GAMM
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:EIL92737.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhod
thiamine biosynthesis protein ThiF
BD02T64_scaffold_111_138
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148377..149204
-----------------
DNA (828bp)
protein (276aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EAS49400.1}; EC=2.7.1.49 {ECO:0000313|EMBL:EAS49400.1};; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonad
Phosphomethylpyrimidine kinase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YG25_MOBAS
phosphomethylpyrimidine kinase
BD02T64_scaffold_111_139
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

149474..150676
-----------------
DNA (1203bp)
protein (401aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5AGH9_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN00595.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter cocc
BD02T64_scaffold_111_140
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

150918..154265
-----------------
DNA (3348bp)
protein (1116aa)
Polyhydroxyalkanoic acid synthase n=1 Tax=Patulibacter medicamentivorans RepID=H0E6A0_9ACTN
Polyhydroxyalkanoic acid synthase {ECO:0000313|EMBL:EHN10798.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patul
putative long-chain acyl-CoA synthase
BD02T64_scaffold_111_141
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154524..154640
-----------------
DNA (117bp)
protein (39aa)
Transposase, mutator type n=1 Tax=Oleispira antarctica RB-8 RepID=R4YSL4_OLEAN
Transposase, mutator type {ECO:0000313|EMBL:CCK77925.1}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;" source="Oleispira antarctica RB-8.;"
Displaying items 121-141 of 141 in total

View Taxonomy