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BD02T64_scaffold_5413_6

Organism: BD02T64_Gammaproteobacteria_53_59_partial

partial RP 34 / 55 MC: 1 BSCG 36 / 51 ASCG 10 / 38 MC: 1
Location: comp(4794..5345)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Shewanella frigidimarina (strain NCIMB 400) RepID=Q080F8_SHEFN similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 177.0
  • Bit_score: 129
  • Evalue 4.40e-27
putative sigma70-like protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 182.0
  • Bit_score: 131
  • Evalue 1.60e-27
RNA polymerase sigma factor SigZ similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 177.0
  • Bit_score: 129
  • Evalue 1.20e-27

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Taxonomy

RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGCCCATCGATACGAGTGAATGGTTCCTTTTTAAAAATGCCCTGCATGCCTATATCGCGCGGCGAGTGGCCACCGACGCTGTCGACGATATCGCCGCAGAGGTGATGCTGCGTATGGTTGATCAGACCTCGGGCTTTAGCGCGGCGGCGAAACCGATGGCCTGGATGTACCGCGTTGCCGCTAACTTGATTGCCGATCACTATCGCCGCCGTGGTGTCGAAGAGCGACTTTTTACCCCTGGTGAACAGACTGAATTTAGCGACGGGCTCAGCGAAGAACAGGACTCGCCCCCCGAAAAAGAGCTCGCCCTCTGCCTGTTGCCACTCATCAAGCAGCTGCCAGAGATCTATCGTGAAGCGATACAGGTGGTGGAGATTGAGGGGGAATCACAGGTCAATGCCGCCAAACGGCTTGGTTTATCGACGTCGGCAATGAAGTCTCGGGTACAGCGGGGACGACAGAAACTGAAACAGCTGTTAGTGGCTTGTTGTCGTATTGAAATTAATCAGGAAGGGCTGCTTAGTTACGAACAAAAGCATGACTGTTGTTAG
PROTEIN sequence
Length: 184
MPIDTSEWFLFKNALHAYIARRVATDAVDDIAAEVMLRMVDQTSGFSAAAKPMAWMYRVAANLIADHYRRRGVEERLFTPGEQTEFSDGLSEEQDSPPEKELALCLLPLIKQLPEIYREAIQVVEIEGESQVNAAKRLGLSTSAMKSRVQRGRQKLKQLLVACCRIEINQEGLLSYEQKHDCC*