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cg1_0.2_scaffold_222_c_24

Organism: CG1_02_FULL_OD1_Parcubacteria_48_398_curated

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: 22018..22578

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_CPR12_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 186.0
  • Bit_score: 378
  • Evalue 5.90e-102
RNA polymerase sigma factor id=1827044 bin=GWE2_Bacteroidetes_42_42 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 28.0
  • Coverage: 182.0
  • Bit_score: 80
  • Evalue 1.80e-12
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 29.4
  • Coverage: 180.0
  • Bit_score: 78
  • Evalue 1.90e-12

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Taxonomy

CG_CPR12_01 → CG_CPR12 → Bacteria

Sequences

DNA sequence
Length: 561
ATGGCAGACTCCGACTCAACAAAGCTCAATTTGGCAAACTTACTTGCGCAAAGCGCAAAAGGAGACGCACTTTCCTACCGTGGTGTCTTTGATCATTTACACGGACGGATTTTTCGCTACATACTCTCGCGCTGTTCAAATAGGGATGATGCGCACGATATTACCCAAACCGTATTCATAGATCTTTGGCAGGCGTTGCCGAAATTCGTCTATACATCTGATGAGGAATTTTATGGATTCGTATTTCTCATTGCCAAGCGGAAACTTGGCAAACATTATCGTTCCAGAAAGCCGCACGTGGAATTAGATGATCGTTTCATTGCGGATAATTACCACATAAGCACAGAAGATTATCGCCATCTGGAGCACTTACTGAAAAAACTTAGCTCACGTCAGCAGGAAATACTGCGACTTCGGTACTGGAGCGGTTTAGCTTTTAAAGAAATAGCAACAATCCTTAGGATAAGGGAAGGAACCGCAAAAGTTTGGCACCACCGCGCCGTTAAAAAACTGGAGGCTATCGTTCAAGAGAGCGCACTTTACGAAGAGAAGCATATATGA
PROTEIN sequence
Length: 187
MADSDSTKLNLANLLAQSAKGDALSYRGVFDHLHGRIFRYILSRCSNRDDAHDITQTVFIDLWQALPKFVYTSDEEFYGFVFLIAKRKLGKHYRSRKPHVELDDRFIADNYHISTEDYRHLEHLLKKLSSRQQEILRLRYWSGLAFKEIATILRIREGTAKVWHHRAVKKLEAIVQESALYEEKHI*