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cg_0.2_sub10_scaffold_846_c_10

Organism: CG1_02_SUB10_Pacrubacteria_43_18_curated

near complete RP 47 / 55 MC: 2 BSCG 41 / 51 MC: 2 ASCG 0 / 38
Location: 11791..13089

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, rpod subfamily; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_44_41_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 447.0
  • Bit_score: 725
  • Evalue 5.90e-206
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor id=5803390 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 449.0
  • Bit_score: 528
  • Evalue 5.80e-147
RNA polymerase, sigma 70 subunit, rpod subfamily similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 402.0
  • Bit_score: 374
  • Evalue 4.00e-101

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Taxonomy

R_RIF_OD1_09_44_41 → RIF-OD1-9 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1299
ATGCCGAAAAAAACAACTACAAAAAAACCAAAAACAACACCAAAGAAATCTATTAAGAAGGCTGTTAAAAAAGCGCCGGCAAAAAAAATCGCGGTGAAGAAGGTTGCTAAAAAAGCAGTAAGTTCACGTCCAAGACGCGTGTCCAGACACAGCTCTGGTGACCTGTCTGCTGATTCGAAAGTTATTCCTAAGAAGGTAACAAAGAAAACAGTTTCAAAAAAGAAATCCACCGAAGGATGGGAGCAAAAGGCGCAGATACTTATTCTCAAGGGTCGCGGCCGCGGATTTATTACATATAATGAAATTTTAAAGGATTTTCCTCAGGTTGAACAGGATGTTATTTTTCTAGATGCCCTTTATGAAAAACTTAACGATGCAGGTGTGGATATCCTGGAAAGTGGCGGGCTTCTAGAAACTGAGCCTGAAGAAGTTTTAACGCACAAAAAATACACCTACAAAAGTGGGGATTCATCATACGACTCCATTCAGATGTATTTGAAGGAGATTGGGCAGTACCCGCTTCTTTTAGCTGCAGAAGAGCGAGATCTTGCTCAGCGTATTCAGATGGGGGATGAGGAAGGCAAAAATCTTCTCGCCCGCGCAAACTTACGACTTGTGGTTTCCATTGCAAAAAAATATGTTGGACGAAGCGCGGACCTCACGCTACTTGACCTAATCCAGGAAGGGAACATCGGTCTTTTTAAAGCAGTTGAAAAATTTGATTGGGAAAAAGGCTACAAATTTTCTACATACGCAACATGGTGGATTCGCCAAGCTATTACTCGCGCCTTAGCGGATCAGTCGCGCACTATTCGTATCCCAGTGCATATGGTGGAAACTATTTCAAAATATAAGCAAGTGGTGCGTCGATTGTCTCAAGACCTCGGACGTGAGCCACTTCCAGACGAGGTAGCAACAGAGATGGGTCTTGATGTTGAGAAAATTTACAACATTAAGAAAATTGACCAGGATACTGTTTCTCTTGAGAAACCTATTGGTGACGATGATGATAAATCAACCCTTGGTGAATTTATTGCTGATGAAAAGATACTTTCACCTGCGCAGGATTCTGCCCAAAGGATTCTCTCAGACCAGGTAAAAGAAATATTGAATGACCTTTCTGAAAAAGAGAGAAAGATTCTTGAGCTTAGGCACGGGCTTGTGGATGGTGTGGTGTACACACTAGAGGAGGTGGGTCGCGAGTTTCAGGTAACACGCGAACGTATTAGGCAGATTGAGGCAAAAGCGATTGAAAAAATCCGCGCACATGATAAGGTGGATAAATTGCGGAATTACTAG
PROTEIN sequence
Length: 433
MPKKTTTKKPKTTPKKSIKKAVKKAPAKKIAVKKVAKKAVSSRPRRVSRHSSGDLSADSKVIPKKVTKKTVSKKKSTEGWEQKAQILILKGRGRGFITYNEILKDFPQVEQDVIFLDALYEKLNDAGVDILESGGLLETEPEEVLTHKKYTYKSGDSSYDSIQMYLKEIGQYPLLLAAEERDLAQRIQMGDEEGKNLLARANLRLVVSIAKKYVGRSADLTLLDLIQEGNIGLFKAVEKFDWEKGYKFSTYATWWIRQAITRALADQSRTIRIPVHMVETISKYKQVVRRLSQDLGREPLPDEVATEMGLDVEKIYNIKKIDQDTVSLEKPIGDDDDKSTLGEFIADEKILSPAQDSAQRILSDQVKEILNDLSEKERKILELRHGLVDGVVYTLEEVGREFQVTRERIRQIEAKAIEKIRAHDKVDKLRNY*