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cg_0.2_sub10_scaffold_104_c_11

Organism: CG1_02_SUB10_Thiomicrospira_44_157_curated

near complete RP 46 / 55 BSCG 46 / 51 ASCG 12 / 38 MC: 2
Location: comp(11912..13012)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31IH3_THICR similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 373.0
  • Bit_score: 539
  • Evalue 3.60e-150
secretion protein HlyD Tax=CG_Thiomicrospira_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 366.0
  • Bit_score: 700
  • Evalue 1.00e-198
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 373.0
  • Bit_score: 539
  • Evalue 1.00e-150

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Taxonomy

CG_Thiomicrospira_01 → Thiomicrospira → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1101
ATGAACGTTTTGTCAAAATCCATCTGGGTCGGTGTTGTTATTTTGGGGTTAGTGGGGTGTAGTGATTCTCCGAACGGAGAAACGGCAGTTGCACATAGTTATCAGCAGATAGCGGCGCCAGTCGGTCAAGTCACGCTGGGAACCATTCCTCTGAAAGCGGTCGTGGCGGGCGCCGTCGTCCCGGATCAAAAAGCACAGATTGCTTCGCGTTTAATGGGATATATCAAAGACTTTGATGTGAAGGTCGGGCAAAAAGTCCAAGCGGGTGATTTGTTGTTTTCAATTGACTCAAATGATGTGAACAGTCAGATTTTGCAAGCGCAATCCGCTTATCAGCAGGCCTTGGCTGCTTTGGAGGATGCAAAGCTGGATTATGACCGCTTCTCAAAACTTTATAAAGAAGATTCAGTGTCGAAACAGCAATTTGATAAGGTGTCATTGCAATATAAGGTGGCAAAAGAGAATTTAGTGTCGGCACGTTCCGGGTTCAACCAGGCTAGGTCACAATTGAACTATGCCAATGTGAAAGCCCCTTTTGATGGGATTGTGGTTGAGAAATTAGCGGTTGCGGGTGCTTTGGCTGCCCCGGGTAACCCTGTTTTGGTTTTAGAAAATCTGACGTCTTTAAGTGTGCGCACTCAGGTTTCTGAAGACCTATTTGCGGTGCTACGAAATGGTGATGAAGCTGAAGTTCGTATTGACGGACAACCGCAACCGATTATGGCGACCATTTATACATTGGTCAGTGCGGCTGATCCAAGATCCCGAACGCATACGGTTAAGCTGAGTTTGCCATCGGTGGTGAATGTTAACAGTGGAACCTTTGCCCGGGTTGGCTTTAAACGCGGTGAGCGTCAAACCATGATGGTGCCCAAATCAGCCATTGTCAACCGGTCTGGTATAGAAGGGGTTTTTGTGGTGAAGGACGGTACGGCTTATTTCCATATGGTGCGGTTAGGTGAGTCGATCGGAAACCGGATTGAGATTAAAGCAGGAGTCAATCTTGGCGATCAAATTGTCATTGATAATAATCAAAGCATATTAAATGGCGACAAAATTATCGCTGTTTCTAAGACTGATGACATTAAAGGAGCTGCGTAA
PROTEIN sequence
Length: 367
MNVLSKSIWVGVVILGLVGCSDSPNGETAVAHSYQQIAAPVGQVTLGTIPLKAVVAGAVVPDQKAQIASRLMGYIKDFDVKVGQKVQAGDLLFSIDSNDVNSQILQAQSAYQQALAALEDAKLDYDRFSKLYKEDSVSKQQFDKVSLQYKVAKENLVSARSGFNQARSQLNYANVKAPFDGIVVEKLAVAGALAAPGNPVLVLENLTSLSVRTQVSEDLFAVLRNGDEAEVRIDGQPQPIMATIYTLVSAADPRSRTHTVKLSLPSVVNVNSGTFARVGFKRGERQTMMVPKSAIVNRSGIEGVFVVKDGTAYFHMVRLGESIGNRIEIKAGVNLGDQIVIDNNQSILNGDKIIAVSKTDDIKGAA*