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scnpilot_expt_750_p_scaffold_526

Search features with annotation key words

Displaying items 31-60 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_526_31
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26899..27861
DNA (963bp) protein (321aa)
Chromosome partitioning protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AEV4_9ACTN
Chromosome partitioning protein {ECO:0000313|EMBL:EAR26155.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
parB; transcriptional regulator
scnpilot_expt_750_p_scaffold_526_32
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27969..28910)
DNA (942bp) protein (314aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
ddlB; D-alanine-D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase id=7720422 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
scnpilot_expt_750_p_scaffold_526_33
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28942..30246)
DNA (1305bp) protein (435aa)
Valine-pyruvate aminotransferase id=7720423 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Valine-pyruvate aminotransferase {ECO:0000313|EMBL:EAR26152.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
avtA; valine-pyruvate aminotransferase
scnpilot_expt_750_p_scaffold_526_34
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30272..30595)
DNA (324bp) protein (108aa)
thioredoxin n=1 Tax=Curtobacterium RepID=UPI00034DE771
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
thioredoxin
scnpilot_expt_750_p_scaffold_526_35
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30657..31589)
DNA (933bp) protein (311aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;"
trxB; thioredoxin-disulfide reductase (EC:1.8.1.9)
thioredoxin reductase n=1 Tax=Leucobacter chromiiresistens RepID=UPI0002629EEB
scnpilot_expt_750_p_scaffold_526_36
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31636..33366)
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AEU7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EAR26148.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
MOP family membrane protein
scnpilot_expt_750_p_scaffold_526_37
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33359..34876)
DNA (1518bp) protein (506aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000348A93C
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component {ECO:0000313|EMBL:BAJ74486.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacter
scnpilot_expt_750_p_scaffold_526_38
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34973..36418
DNA (1446bp) protein (482aa)
RNA nucleotidyltransferase n=1 Tax=Curtobacterium sp. B18 RepID=UPI000348139B
RNA nucleotidyltransferase {ECO:0000313|EMBL:EYT66265.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD
poly(A) polymerase
scnpilot_expt_750_p_scaffold_526_39
Rathayibacter toxicus, Rathayibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


36539..36901
DNA (363bp) protein (121aa)
30S ribosomal protein S6 id=7720431 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=145458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Rathayibacter.;" source="Ra
scnpilot_expt_750_p_scaffold_526_40
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36907..37407
DNA (501bp) protein (167aa)
single-stranded DNA-binding protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B685D0
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=110935 species="Bacteria; Actinobacteria; Micr
ssb; single-strand binding protein
scnpilot_expt_750_p_scaffold_526_41
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


37466..37729
DNA (264bp) protein (88aa)
30S ribosomal protein S18 n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AEU2_9ACTN
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
30S ribosomal protein S18
scnpilot_expt_750_p_scaffold_526_42
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


37745..38197
DNA (453bp) protein (151aa)
50S ribosomal protein L9 id=7720434 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
50S ribosomal protein L9
scnpilot_expt_750_p_scaffold_526_43
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38667..40055
DNA (1389bp) protein (463aa)
Replicative DNA helicase {ECO:0000313|EMBL:EPR75103.1}; EC=3.6.1.- {ECO:0000313|EMBL:EPR75103.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" sourc
dnaB; replicative DNA helicase (EC:3.1.-.-)
Replicative DNA helicase n=1 Tax=Leifsonia rubra CMS 76R RepID=S7XGJ4_9MICO
scnpilot_expt_750_p_scaffold_526_44
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40117..40332
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:AGP33718.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_expt_750_p_scaffold_526_45
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40355..40660
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LS36_HALO1
Uncharacterized protein {ECO:0000313|EMBL:EYF00546.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_expt_750_p_scaffold_526_46
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

40697..42493
DNA (1797bp) protein (599aa)
ABC-1 domain protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QVN4_METTR rbh
Putative unusual protein kinase {ECO:0000313|EMBL:EGJ34370.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_526_47
Leifsonia sp. SCN1, Leifsonia, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42530..43162
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000288AD6F
Putative uncharacterized protein id=7720436 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
scnpilot_expt_750_p_scaffold_526_48
unknown

Not on your lists

43159..43494
DNA (336bp) protein (112aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_526_49
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43505..44899)
DNA (1395bp) protein (465aa)
purB; adenylosuccinate lyase (EC:4.3.2.2)
adenylosuccinate lyase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B4022E
Uncharacterized protein {ECO:0000313|EMBL:ERG64138.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
scnpilot_expt_750_p_scaffold_526_50
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44899..45318)
DNA (420bp) protein (140aa)
membrane protein n=1 Tax=Microbacteriaceae RepID=UPI00036B070C
Contig_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIU03629.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
hypothetical protein
scnpilot_expt_750_p_scaffold_526_51
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45360..46424
DNA (1065bp) protein (355aa)
Biosynthetic Aromatic amino acid aminotransferase beta {ECO:0000313|EMBL:EPR75112.1}; EC=2.6.1.57 {ECO:0000313|EMBL:EPR75112.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microb
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000381A7A0
hisC2; histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
scnpilot_expt_750_p_scaffold_526_52
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46455..47558
DNA (1104bp) protein (368aa)
Pyruvate dehydrogenase E1 component, alpha subunit id=7720444 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Pyruvate dehydrogenase E1 component, alpha subunit {ECO:0000313|EMBL:EAR26132.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
putative 2-keto acid dehydrogenase,dehydrogenase E1 beta component
scnpilot_expt_750_p_scaffold_526_53
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47555..48637
DNA (1083bp) protein (361aa)
Putative 2-keto acid dehydrogenase,dehydrogenase E1 beta component {ECO:0000313|EMBL:CAN03030.1}; EC=1.2.4.- {ECO:0000313|EMBL:CAN03030.1};; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcal
Putative 2-keto acid dehydrogenase,dehydrogenase E1 beta component n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CV91_CLAM3
putative 2-keto acid dehydrogenase,dehydrogenase E1 beta component
scnpilot_expt_750_p_scaffold_526_54
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48665..49948
DNA (1284bp) protein (428aa)
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000313|EMBL:EPR75115.1}; EC=2.3.1.12 {ECO:0000313|EMBL:EPR75115.1};; TaxID=1348338 species="Bacteria; Actinobacteri
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Leifsonia rubra CMS 76R RepID=S7VXT2_9MICO
branched-chain alpha-keto acid dehydrogenase subunit E2
scnpilot_expt_750_p_scaffold_526_55
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50009..50941
DNA (933bp) protein (311aa)
ABC transporter, substrate-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RSU4_LEIAQ rbh
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:ERK71886.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATC
ABC transporter solute binding protein
scnpilot_expt_750_p_scaffold_526_56
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50938..51798
DNA (861bp) protein (287aa)
ABC transporter, ATP-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TB05_LEIAQ
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK71887.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 1466
ABC transporter ATP-binding protein
scnpilot_expt_750_p_scaffold_526_57
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

51795..52670
DNA (876bp) protein (292aa)
ABC transporter, permease protein id=7720449 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
ABC 3 transport family protein {ECO:0000313|EMBL:ERK71888.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ABC-3 protein
scnpilot_expt_750_p_scaffold_526_58
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52667..53068
DNA (402bp) protein (134aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B47D85
Contig_51, whole genome shotgun sequence {ECO:0000313|EMBL:KIU02584.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
ferric uptake regulator family protein
scnpilot_expt_750_p_scaffold_526_59
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53106..54458)
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B6EB9B
Uncharacterized protein {ECO:0000313|EMBL:KIC58723.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
scnpilot_expt_750_p_scaffold_526_60
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54448..55191)
DNA (744bp) protein (248aa)
Putative membrane protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RHM6_CLAMS
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAQ02587.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedo
Displaying items 31-60 of 88 in total

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