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scnpilot_expt_750_p_scaffold_174_12

Organism: SCNPILOT_EXPT_750_P_Actinomycetales_72_13

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 10091..10669

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA-processing protein RimM n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B6203D similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 179.0
  • Bit_score: 267
  • Evalue 1.40e-68
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 188.0
  • Bit_score: 251
  • Evalue 1.10e-63
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 187.0
  • Bit_score: 247
  • Evalue 4.20e-63

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Taxonomy

Leifsonia aquatica → Leifsonia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 579
GTGGCCAGGCCCGAGCGTCCGCCGGGGACCGAGCTGCGCGTCGGCCGGCTGACGAAGGCGCACGGGCTCAAGGGCGCGCTGAAGCTCGATCTGTACACCGACGACCCGGCGCGGCGCTTCGTGCCCGGCGCGACGTTCGCGCTCCAGGTCCCGGACTCGAGCCCCTGGCACGGCCAGCGGCTCGAGCTCGTCGAGCTGAAGTGGTTCAACGGGGTGCCCGTCGGGTTCTTCGCGGGCGTGACCGATCGCACCGCGGCGGAGGGCCTCGTCAAGGCGGTGCTCTGGGTCGAGGTCGGGGAGGAGCCCCAGGAGGAGGACGCCTGGTACTACCACCAGCTCGTCGGCCTCCGCGTGCTGCGCGACGGCGTCGAGCTCGGCCGGGTGGTCCGGGTCGACGAGCTCCCGGCGCAGGACCTGCTCGCGGTCGAGACCGCGCACGGCGAGGTGCTCGTCCCGTTCGTCAAGGCGATCGTGACCGAGGTCGACGTCGCGGGCGGCACGGTCACCGTGGACCCGCCCGGCGGCCTCTTCGAGGAGCCGGGGGAGTCCGGGGCCGAGGCGGCCGGCGAGACCCCCTGA
PROTEIN sequence
Length: 193
VARPERPPGTELRVGRLTKAHGLKGALKLDLYTDDPARRFVPGATFALQVPDSSPWHGQRLELVELKWFNGVPVGFFAGVTDRTAAEGLVKAVLWVEVGEEPQEEDAWYYHQLVGLRVLRDGVELGRVVRVDELPAQDLLAVETAHGEVLVPFVKAIVTEVDVAGGTVTVDPPGGLFEEPGESGAEAAGETP*