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scnpilot_expt_750_p_scaffold_669_12

Organism: SCNPILOT_EXPT_750_P_Actinomycetales_72_13

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 10314..11255

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003488115 similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 313.0
  • Bit_score: 540
  • Evalue 1.10e-150
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KDA05310.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH1 similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 313.0
  • Bit_score: 542
  • Evalue 3.90e-151
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 311.0
  • Bit_score: 522
  • Evalue 6.50e-146

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Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGTCTCAAGGAACGAGCGGCGTCACGCTGCAGCAGCTCCACTACTTCATCGAGGTCGCCGCCGAGGGGTCGATCACCGCCGCCGCCGAACTGCTCTACGTCGCCCAGCCGACGATGTCCGCGGCGATGAAGGACCTCGAGACCCGGGTGGGACGCACCCTGCTCCTCCGCTCCGCCCGCGGTGTCACGCTCACCGTCGACGGGGTGGAGTTCCTCGGATACGCCAGGCAGGTCGTCGAGCAGGTGGCGCTCCTCGAGCAGCGCTACCTCGGTCGACCGCCGTCGCGACGCCTGCTCGGGGTGTCGGCGCAGCACTACTCGTTCGCGGTCGACGCGTTCGTCCGGATGGTGAGGGGCAGCGGGGCGGCCGAGTACGAGTTCTCCCTGCGCGAGACCCGCACCTGGGACATCATCGAGGACGTCCGGACGCTGCGCAGCGAGCTCGGCATCCTCTACCGGAGCGACTTCAACCGGAAGGTCATCGACAAGCTGCTCCGGGACTCCGGGCTCGCGTTCCACCCGATCTTCCTCGCCGAGCCGCACATCTTCGTCTCCCGGAGGAACCCGCTCGTCTCCCGAGACCGCGTCGGGCTCGCCGATCTCGCCGACCTGCCGCGGCTCACCTTCGACCAGGGGGCGAACAACTCGTTCTACTTCGCCGAGGAGATCCTCTCCACCCTGTCGAGCAGACAGGAGATCCGGGTCTCCGACCGAGCGACGATCTTCAGCCTCATGATCGGGCTCGACGGCTACACGATCTCGACGGGCATCATCAGCGACGACCTCGACCCGGAGATCGTCGCCATCCCGCTCGACGTCGAGGAACGCATCGAGATCGGCTGGATCAGCCACGCCGCGATCCCGCTCACCGAGCAGGCGCAGCGCTACCTCGCCGAGGTGCGGGCCGTCGTCTCGGGCTTCGGCGTGGCGCTGCTCGGCTAG
PROTEIN sequence
Length: 314
MSQGTSGVTLQQLHYFIEVAAEGSITAAAELLYVAQPTMSAAMKDLETRVGRTLLLRSARGVTLTVDGVEFLGYARQVVEQVALLEQRYLGRPPSRRLLGVSAQHYSFAVDAFVRMVRGSGAAEYEFSLRETRTWDIIEDVRTLRSELGILYRSDFNRKVIDKLLRDSGLAFHPIFLAEPHIFVSRRNPLVSRDRVGLADLADLPRLTFDQGANNSFYFAEEILSTLSSRQEIRVSDRATIFSLMIGLDGYTISTGIISDDLDPEIVAIPLDVEERIEIGWISHAAIPLTEQAQRYLAEVRAVVSGFGVALLG*