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scnpilot_expt_750_p_scaffold_818_5

Organism: SCNPILOT_EXPT_750_P_Actinomycetales_72_13

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(5673..6674)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor NusA n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BBU1_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 334.0
  • Bit_score: 507
  • Evalue 1.10e-140
nusA; transcription elongation factor NusA similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 334.0
  • Bit_score: 507
  • Evalue 3.00e-141
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clav similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 334.0
  • Bit_score: 507
  • Evalue 1.50e-140

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGGACATCGACATCCGCAATCTCCGCGACGTCTCGGTCGAGCGGGAGATCCCGTTCGAGGAGCTCGTCTCGATCGTCGAGCAGGCCGTCCTGATGGCCTATCTGCGGCACACCGGCCAGCTCGACCACAAGCCCGGCGGCAACGAGGGCAAGGCGCGCGTCGAGCTCGACCACCGCACCGGCCACGTCCGCATCTACGTCCCCGAGCGCGACGAGGAGGGCGAGGTGCTCGGCGAGGTCGAGGACGAGCCGGAGGACTTCGGCCGGATCGCCGCGGCGGCGGCGAAGCAGGTGATCGTGCAGCGCATGCGCGACATCGGCGACGAGAAGGTGCTCGGCGAGTTCAAGGGCAAGGAGGGCGACATCGTCGCCGGCATCATCCAGCAGGGCCCGAACCCGCGGATGGTCCACGTCGACCTCGGCGGCAAGATCGAGGGCATCCTGCCGCCGGAGGAGCAGGTGCCGGGCGAGGACTACGCGCACGGCACGCGCCTGCGGGCGTTCGTCACGAGCGTGACCCGCGGCCAGAAGGGCCCGTCGATCACGCTGTCCCGGACCCATCCCGGTCTCGTCCGCAAGCTGTTCGCGCTCGAGGTGCCGGAGATCGCGCAGGGGCTCGTCGAGATCGCCTCGGTCGCGCGCGAGGCCGGCCACCGCACCAAGATCGCGGTCCGCGCCACGCAGCCCGGCGTCAACGCGAAGGGCGCGTGCATCGGCGAGCTCGGCTCGCGGGTGCGCGCCGTCACCGCGGAGCTCGCGGGGGAGAAGATCGACATCGTCGACTGGTCGGAGGACCTCCCGGCGTTCGTCGCGAACGCGCTGAGCCCGGCGAAGGTCACCGAGGCGTTCGTGATCGACGCCGCGACGAAGGCGGTGCGCGCGCTCGTCCCCGACTACCAGCTCTCGCTCGCGATCGGCAAGGAGGGCCAGAACGCCCGCCTCGCCGCGAAGCTGACCGGCGCCAAGATCGACATCCAGCCCGACTCGGTGATGGAGGCCTGA
PROTEIN sequence
Length: 334
MDIDIRNLRDVSVEREIPFEELVSIVEQAVLMAYLRHTGQLDHKPGGNEGKARVELDHRTGHVRIYVPERDEEGEVLGEVEDEPEDFGRIAAAAAKQVIVQRMRDIGDEKVLGEFKGKEGDIVAGIIQQGPNPRMVHVDLGGKIEGILPPEEQVPGEDYAHGTRLRAFVTSVTRGQKGPSITLSRTHPGLVRKLFALEVPEIAQGLVEIASVAREAGHRTKIAVRATQPGVNAKGACIGELGSRVRAVTAELAGEKIDIVDWSEDLPAFVANALSPAKVTEAFVIDAATKAVRALVPDYQLSLAIGKEGQNARLAAKLTGAKIDIQPDSVMEA*