ggKbase home page

scnpilot_expt_750_bf_scaffold_505_1

Organism: SCNPILOT_EXPT_750_BF_Plasmid_61_16

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 223..519

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BQW2_OLICM similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 86.0
  • Bit_score: 115
  • Evalue 3.50e-23
Transcriptional regulator {ECO:0000313|EMBL:ETR79456.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 98.0
  • Bit_score: 165
  • Evalue 3.10e-38
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 86.0
  • Bit_score: 115
  • Evalue 9.80e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 297
ATGAACACGAAAGTCTCCGGCCGGAAGGCCGCGCACGCCGCCCGCGGCAACACGCTGCTCGTCGCATTTCAGGACGCGCTCGAGCGCCTGCGCAAGGAAATGGGACTGACTCGTTGCGCCTTCGCGGAACGCCTCGGCATTCCTCGGTCGAGTTACTTTCACCTGATGACGGAGGCAGCAAACCCGAGCCTCGATTACATCGAGCTGATCGCGGAGCGCGCGGGCATCGAGCCGATCGCCTTTTTGGGCAGAGACGGCTGGCGAGACGACCGCCGTCTCAGGGTCGGAGCGCGTTAA
PROTEIN sequence
Length: 99
MNTKVSGRKAAHAARGNTLLVAFQDALERLRKEMGLTRCAFAERLGIPRSSYFHLMTEAANPSLDYIELIAERAGIEPIAFLGRDGWRDDRRLRVGAR*