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scnpilot_expt_750_bf_scaffold_505_47

Organism: SCNPILOT_EXPT_750_BF_Plasmid_61_16

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 38109..39932

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion protein VirB4 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK43_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 522.0
  • Bit_score: 811
  • Evalue 6.30e-232
Type VI secretion protein {ECO:0000313|EMBL:KIZ46696.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 522.0
  • Bit_score: 822
  • Evalue 2.90e-235
virB4; type IV secretion protein VirB4 similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 522.0
  • Bit_score: 811
  • Evalue 1.80e-232

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1824
ATGGTCGCGCGTGCTTTGCTTGATGAACTGACCTTCGGCGCGGTGTCGCGGCGCGAGCGTCCTGTCGCCTCGCACTTGCCCTACACGCGCCACGTCGACGACCACATCATCAAGACCCGCGACGGCCTAGTGCTTACCATCCTCAAGCTCGACGGCTACTCCTTCGAGACCTCCGACATGAGCGAGGTCAACGCGCGGCTGCTGGGCCGCAATGACGTGGTCCGCACCCTCGCCAATTCCCGGTTTGCCCTGGCCGCCCACATCATCCGCCGAGAGGTGCAGCCGCGCATCGACTCGACCTTCGACAACCCGCTGTGTCGCGAACTCGACGAGCGCTACGACGCGGCGCTGTCGAAGCGGCGCATGTTCGTCAATGACATCTATCTCACCATTGTCCGCCGTCCCCTCCAGGGGCAGGCCGGCACTTTCGATGTGATGTTGACCAAGCTGCTCGGCCGCAAGGACGAGGCTGGCGAGTCGGTCGCTGCCCAAACCGGCCTGACCGAACTTCGGGACGCTGCGACGGCGGTCCGCGAGAACCTGGCGGGTTATGGAGCCCGGCCAATGCATCTGCCGCGGATGAACATCGCCGACGCGCTGTCGATGAAGCGCATCTTCTTCGGCCGCAACGCGGTCGAAGTCCGCGGTGCGGGCCCCGAAGACACGCGCTTCGGCGCGATGGTGTCGATCCGCGAATATCCGGCGCAAACCGGACCGGGCTCGTTCGACAACCTCTTGCGTGTGCCACACGAGTTCATCGCGACGCAGACTTTTGCCATCGTCGATCGCCCGGAGGCGGCCAAGCAGATCGACCGCGTCTCGCGCCAGGTCGACATGTCCGACGAGGCGGGCTCGATCGTCGCCGAACATCTCGATGACGCGCGCGACGAGTTGCTTGCGTCGGAGGCGATCTATGGCGAGCACCACATGACGGTGATGTGCCTCGGGTGCGATCTCCCGGAAGTGGGCGCGGCGATCACGGCAGTTGGCGCGGCGCTGACTGATCGTTCGGTGATCTGGACCCGCGAGGACCTTAATTGCGAGCCCGCCTTTTGGGCGCAGTTGCCCGGCAATTTCCAGTACATCGCCCGCAAGGCGGTAATCTCGTCGAAGAATTTTGCAGGCTTTACATCACTGCACAATTATCCGAGCGGACGCCCAGACGGCAACCATTGGGGGCCGGCGATATCGGTGTTCGAGACGACGTCGCAGACGGCGTATTATTACAACCACCACGTCCGCGATATCGGCAATTTCACCGTGGTCGGACCGACCGGATCCGGCAAGACGGTCTTTCTGTCGTTCATCGCGGCACAGACGCAGCGCGTCCAGCCCCGACCGAAATTGCTGTTCGTCGACAAGGATCGCGGCGCCGAGATCTTCATCCGCGCGCTCGGCGGTCAGTATGAAACGCTGATGCCCGGCGAGCCGACCCCTCTACCAGCTCTTCGCCTTCATGTTGCGGCCAGCGAACGGCGCCGAGCTGACGGCATCCGAGGAACAGGTGATCCGCAACGCGATCGCGGCGGTGCTCACCGGTGGTCCGGCGGGTCGGACGCTGAAGGCCTTTTCGACTTTGTTGCGCGGCCGCATCAGGGCCGGGGAGGGCGACCTGCTGGCGCGTCTCGAGAGCTGGATGCGCCCCGACCAGCGCGGCTGGCTGTTCAACAACGAGGAGGACCAGTTCTCCTTGTCGAGCGTATTCGGTTTCGACATGACGCGGGTGCTCGACGATCCCGTCATTCGCACCGCGGCGCTGATGTACATTTTCCACAGGACCGAGGAACTGCTCACCGGCGACCCGGTGATGATCTTCCTCGATGA
PROTEIN sequence
Length: 608
MVARALLDELTFGAVSRRERPVASHLPYTRHVDDHIIKTRDGLVLTILKLDGYSFETSDMSEVNARLLGRNDVVRTLANSRFALAAHIIRREVQPRIDSTFDNPLCRELDERYDAALSKRRMFVNDIYLTIVRRPLQGQAGTFDVMLTKLLGRKDEAGESVAAQTGLTELRDAATAVRENLAGYGARPMHLPRMNIADALSMKRIFFGRNAVEVRGAGPEDTRFGAMVSIREYPAQTGPGSFDNLLRVPHEFIATQTFAIVDRPEAAKQIDRVSRQVDMSDEAGSIVAEHLDDARDELLASEAIYGEHHMTVMCLGCDLPEVGAAITAVGAALTDRSVIWTREDLNCEPAFWAQLPGNFQYIARKAVISSKNFAGFTSLHNYPSGRPDGNHWGPAISVFETTSQTAYYYNHHVRDIGNFTVVGPTGSGKTVFLSFIAAQTQRVQPRPKLLFVDKDRGAEIFIRALGGQYETLMPGEPTPLPALRLHVAASERRRADGIRGTGDPQRDRGGAHRWSGGSDAEGLFDFVARPHQGRGGRPAGASRELDAPRPARLAVQQRGGPVLLVERIRFRHDAGARRSRHSHRGADVHFPQDRGTAHRRPGDDLPR*