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scnpilot_expt_750_bf_scaffold_505_60

Organism: SCNPILOT_EXPT_750_BF_Plasmid_61_16

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(50526..50855)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Afipia birgiae RepID=UPI000313EF84 similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 108.0
  • Bit_score: 115
  • Evalue 3.00e-23
Membrane protein {ECO:0000313|EMBL:KIZ48012.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustri similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 109.0
  • Bit_score: 118
  • Evalue 8.40e-24
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 109.0
  • Bit_score: 112
  • Evalue 9.20e-23

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
TTGCCGACCTGGATCAAGGAAGTTCTTGATCACTTCGGCTTGTCAAATCTCGACATTATCCGTGAGCGGTTGTCGCAACTCTTCTCCCAGTTCCTCCAGCTGCTGGTCTCGCATGCGGTCACTGCCGGACAGAGCACGTTTAAGTTCATAGTCGCTCTAGGTGTGATGGTTTATCTGATGTTTTTCCCGTTAAGGGACGGCACGAGTCTGACCCGCCGGATCAAGGATGCCGTTCCGTTACGTCCCGCGCAGCGGGATGAACTCTTCGAAAAGTTCACCATCGTTGTTCGCGCCACCGTCAAGGGTTCGGTGCTCGTGGCCATCCTTTAG
PROTEIN sequence
Length: 110
LPTWIKEVLDHFGLSNLDIIRERLSQLFSQFLQLLVSHAVTAGQSTFKFIVALGVMVYLMFFPLRDGTSLTRRIKDAVPLRPAQRDELFEKFTIVVRATVKGSVLVAIL*