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scnpilot_expt_750_bf_scaffold_580_10

Organism: SCNPILOT_EXPT_750_BF_Plasmid-possible_56_10

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(9815..11140)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Thauera sp. 27 RepID=N6YBS8_9RHOO similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 414.0
  • Bit_score: 305
  • Evalue 6.20e-80
Signal peptide protein {ECO:0000313|EMBL:KIF82252.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp similarity UNIPROT
DB: UniProtKB
  • Identity: 40.4
  • Coverage: 418.0
  • Bit_score: 308
  • Evalue 1.40e-80
diguanylate cyclase/phosphodiesterase / diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 419.0
  • Bit_score: 297
  • Evalue 6.30e-78

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Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1326
ATGGGCGACCTATTTGAACTTCTCTCATCGAACGTGGTGGATGCGGGAGAACCCGCTGCCCGGTTGGCGCCACCTGATCGACTCCAGTTCGAGCTGGCGATTGACCGGTGGATCCGAGCATTCGGCATGGAGAATACGGCGGTCGGCCTTATTGACATCAACGGTTTCTCGGAATTGCTGGCCAGGAACGGGCAGCAATACGCAAATGCATTACTTTGTGGAGTCGCTGCGCGGATCTCGGAAGTCTTCCGTGACGATCGAATCGTCGGCCGGATCGGCATGGATACCTTTGGAGTAGTCGGGCACCTGGAAGAGGTGACTCATCGGCGCTTGAAGGATGTGAAGCGAAATCCTTTCCTGATTGCCGGTCAAAAAAACATGATTTCTGTGTCGATCGGGATCGCCCAAGGGAAGGAATGCGACGGCACTGGCCACGCCCTGCTGCTGGCCGCCACGTTGGCCATGAAATCGGCCAAGGTTAAGGGGTATGGCGGCCACGCCTACTATTCCCATGAAATGGGGTTGGCTGCCCGGCGCCGCAGTGAGCTCATGGGGCTTCTTCATGCAGCGGTGCAGGGCCGAGATATGTACTTGGCGTTCCAACCTCAACTGGCCTTGCCTCCTGTCGGCCTGGCGGCTATCCCGGTGGGGGTGGAGGCGTTGCTGCGGTGGCGCTTGTCGACGGGGGAAATGGTTCCCCCGGATGTGTTTCTACCGTTGGCTGAACAATCCGGCTTGGCAACGAGCCTGGGCTATCAGGTGATCTCGATGGCCTTAGAGACTGAGCAACGACTGCGTGCTCAAGGCTTCGCAGGATTGCGAATGGCAGTAAATGTCTCGGTCCCACAATTTCGAGATAGCGCATTTGCCGACACAGTTCGGCAAGCCATGACGGACTCCGGATGCTCTCCGGATGCACTGGAATTGGAAATCACCGAGTCAGTGGCTGGATTGGGTGAAGAGCATCTGATCGACGTGCTCAAAGAACTTCAGGCGCTTGGAGTGAGTATTGCCATTGACGACTTCGGAACGGGTTATTCGTCTCTGGCGTATATCAACCGGCTGCCGGCAGACCGGTTGAAAATCGACAAATCATTCGTTAACTCCCTGGGAGTTGCCGGGCCTGAGGCATGCATCGCCAAGACCATCATTGGCATGGGCCATGCCTTGGGCTTGACGGTGTTAGCAGAAGGCGTTGAGACGGAAGCCCAACTGTTGGCTCTTCAGGGCATCGGCTGTGACGAAGTGCAAGGCTTCTATTTTGCCAAGCCAATGGTTGAGCAAGACTTGGTAGCGTGGCTGCGCGAGCAATTGCGGACAGGCTGA
PROTEIN sequence
Length: 442
MGDLFELLSSNVVDAGEPAARLAPPDRLQFELAIDRWIRAFGMENTAVGLIDINGFSELLARNGQQYANALLCGVAARISEVFRDDRIVGRIGMDTFGVVGHLEEVTHRRLKDVKRNPFLIAGQKNMISVSIGIAQGKECDGTGHALLLAATLAMKSAKVKGYGGHAYYSHEMGLAARRRSELMGLLHAAVQGRDMYLAFQPQLALPPVGLAAIPVGVEALLRWRLSTGEMVPPDVFLPLAEQSGLATSLGYQVISMALETEQRLRAQGFAGLRMAVNVSVPQFRDSAFADTVRQAMTDSGCSPDALELEITESVAGLGEEHLIDVLKELQALGVSIAIDDFGTGYSSLAYINRLPADRLKIDKSFVNSLGVAGPEACIAKTIIGMGHALGLTVLAEGVETEAQLLALQGIGCDEVQGFYFAKPMVEQDLVAWLREQLRTG*