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scnpilot_expt_750_bf_scaffold_5484_2

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_63_6_fragment

partial RP 6 / 55 BSCG 4 / 51 ASCG 2 / 38
Location: comp(1059..1409)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=IHFA_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 110.0
  • Bit_score: 194
  • Evalue 7.00e-47
ihfA; integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 110.0
  • Bit_score: 194
  • Evalue 2.00e-47
Integration host factor subunit alpha {ECO:0000255|HAMAP-Rule:MF_00380}; Short=IHF-alpha {ECO:0000255|HAMAP-Rule:MF_00380};; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizob similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 110.0
  • Bit_score: 194
  • Evalue 9.80e-47

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGATTGTGGGGCAGGCGATGAGCGAAGTTGGCAAGACCGTAACACGCGCCGATCTGTGCGAGGCCGTCTATCAGAAGGTGGGGCTGTCGCGGACTGAATCCTCCGCCTTTGTGGAACTGGTGCTGAAGGAAATCACCGACTGCCTCGAGAAGGGCGAGACGGTGAAGCTGTCCTCGTTCGGCTCGTTCATGGTCCGTCAGAAAGGCCAGCGGATCGGCCGCAATCCCAAGACCGGCACCGAGGTTCCCATCTCGCCGCGCCGGGTGATGGTGTTCAAGCCATCGGCCATCCTCAAGCAGCGCATCAACGGCCACGCCAATGGCAGCGCCGTTGTCGCCGAGTCGGACTAG
PROTEIN sequence
Length: 117
MIVGQAMSEVGKTVTRADLCEAVYQKVGLSRTESSAFVELVLKEITDCLEKGETVKLSSFGSFMVRQKGQRIGRNPKTGTEVPISPRRVMVFKPSAILKQRINGHANGSAVVAESD*