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scnpilot_expt_750_bf_scaffold_1778_6

Organism: SCNPILOT_EXPT_750_BF_Sphingomonas_67_7_partial

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 9 / 38
Location: 3817..5529

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Sphingomonas elodea RepID=UPI0002631E5C similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 570.0
  • Bit_score: 1058
  • Evalue 0.0
  • rbh
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111, ECO:0000313|EMBL:AJP70990.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphing similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 573.0
  • Bit_score: 1050
  • Evalue 0.0
30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 573.0
  • Bit_score: 1050
  • Evalue 0.0

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1713
ATGGCCACTACGGCAAATCCGAGCCGCGACGATTTCGCGGCGCTTCTCGAACAGACTCTCGGTCAGGCTGACGGCTTCGAAGGCCGCGTCGTGATCGGCACCGTCACCGGCATCGAGAACGACCTCGCGGTCATCGACGTCGGCCTCAAGTCCGAAGGCCGCGTGCCGCTGCGCGAATTCGCCGCGCCGGGCCAGAAGGCCGATCTGAAGGTCGGCGACGAAGTCGAAGTCTATGTCGACCGCGTCGAGAACGCCAATGGCGAAGCGATGCTCAGCCGCGACCGCGCCCGCCGCGAAGCCGCCTGGGACAAGCTGGAAGCCGAATTCGCCAAGTCGGCCCGCGTCGAGGGCGTCATCTTCGGCCGCGTCAAGGGCGGCTTCACCGTCGACCTTTCGGGCGCGGTGGCCTTCCTCCCCGGCTCGCAGGTCGACATCCGCCCGGTGCGCGACGTCACCCCGCTGATGGACATCCCGCAGCCCTTCCAGATCCTCAAGATGGACCGCAAGCGCGGCAACATCGTCGTGTCGCGCCGCGCCGTGCTCGAAGAGACCCGCGCCGAGCAGCGTTCGGGCCTCATCCAGAGCCTGGCCGAGGGCCAGATCATCGACGGCGTCGTCAAGAACATCACCGATTACGGTGCGTTCGTCGACCTGGGCGGCATCGACGGCCTGCTGCACGTCACCGATCTGAGCTACAAGCGCGTCAACCACCCGTCCGAGATGCTCAACATCGGCGACACGGTCCGCGTCCAGATCATCCGCATCAACCGCGACACCCAGCGCATCTCGCTCGGCATGAAGCAGCTCGAGAGCGATCCGTGGGATGGCGCCGCGGTGAAGTATCCGGTCGGCGCGAAGCTGTCGGGCCGCGTGACCAACATCACCGAATATGGTGCGTTCGTCGAGCTCGAGCCGGGCATCGAGGGCCTGGTCCACGTCTCGGAGATGAGCTGGACCAAGAAGAACGTGCACCCGGGCAAGATCGTCTCGACCTCGCAGGAAGTCGAAGTCGTGGTGCTCGAGGTGGACGCCGAGAAGCGCCGCATCTCGCTCGGCCTCAAGCAGGCCCAGCAGAACCCGTGGGAGAAGTTCGCGGCCGAGCACCCGGTCGGCACCGAGGTCGAGGGCGAAGTCAAGAACGCCACCGAGTTCGGCCTGTTCATCGGCCTGGACAACGACGTCGACGGCATGGTCCACATGTCGGACATCGCCTGGGGCATCTCGGGTGAGGACGCGCTCAACCTGCACCGCAAGGGCGAAGTGGTTAAGGCCATCGTGCTCGCCGTGGAGTCGGACAAGGAGCGCATCTCGCTCGGCATGAAGCAGCTCGAGCGTGGCGGCGTCGCCGCTGCGGGTTCGACCACTTCGGCCGATCGCCTGAACAAGAACCAAGTCGTCACCGTGACCATCCTCGAAGTCCGCGACGCGGGCCTCGAAGTGCAGGTTGGCGAAGACGGCGCGACCGGCTTCATCAAGCGCACCGACCTCGGCCGCGACCGCGACGAGCAGCGTCCGGAGCGTTTCCAGGTCGGCCAGAAGCTCGATGCGATGGTCACCGGCTTCGACCGTTCGAAGAAGCCGACCTTCTCGGTCAAGGCGATGCAGATCGCCGAGGAGAAGCAGGCGGTGGCGCAGTATGGCTCGTCCGATTCGGGCGCGTCGCTGGGCGACATCCTGGGCGAGGCCCTCAAGGCCCGCAACGAAAAGAACTAA
PROTEIN sequence
Length: 571
MATTANPSRDDFAALLEQTLGQADGFEGRVVIGTVTGIENDLAVIDVGLKSEGRVPLREFAAPGQKADLKVGDEVEVYVDRVENANGEAMLSRDRARREAAWDKLEAEFAKSARVEGVIFGRVKGGFTVDLSGAVAFLPGSQVDIRPVRDVTPLMDIPQPFQILKMDRKRGNIVVSRRAVLEETRAEQRSGLIQSLAEGQIIDGVVKNITDYGAFVDLGGIDGLLHVTDLSYKRVNHPSEMLNIGDTVRVQIIRINRDTQRISLGMKQLESDPWDGAAVKYPVGAKLSGRVTNITEYGAFVELEPGIEGLVHVSEMSWTKKNVHPGKIVSTSQEVEVVVLEVDAEKRRISLGLKQAQQNPWEKFAAEHPVGTEVEGEVKNATEFGLFIGLDNDVDGMVHMSDIAWGISGEDALNLHRKGEVVKAIVLAVESDKERISLGMKQLERGGVAAAGSTTSADRLNKNQVVTVTILEVRDAGLEVQVGEDGATGFIKRTDLGRDRDEQRPERFQVGQKLDAMVTGFDRSKKPTFSVKAMQIAEEKQAVAQYGSSDSGASLGDILGEALKARNEKN*