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scnpilot_expt_750_bf_scaffold_1778_10

Organism: SCNPILOT_EXPT_750_BF_Sphingomonas_67_7_partial

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 9 / 38
Location: comp(9076..9342)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Sphingobium indicum B90A RepID=I5BA51_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 75.0
  • Bit_score: 74
  • Evalue 8.00e-11
XRE family transcriptional regulator {ECO:0000313|EMBL:EIM66453.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 75.0
  • Bit_score: 74
  • Evalue 1.10e-10
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 75.0
  • Bit_score: 72
  • Evalue 5.00e-11

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Taxonomy

Sphingobium indicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
TTGTGCCACAGGGCGACCAGTCTGCGGGTGGAGAAAGACCCCGATCTCATCGCGCTAGGACAGAATCTTCGCCGCCTGCGGCGCGAGGCCAATCTGACGCAGGAAGAACTGGCGAGCCGCGCCGGACTCAGCGCCAACTATGTCGGTGAAATCGAACGTGGCGAGCGCAATCCGGGGGCGCTGGCGTTGTTCGCCATTACGCGGGGGCTTGGTGTGCCACCTGCAACATTGTTCGAAAAATATCGGGACAGTGATTTCCCTGCGTAA
PROTEIN sequence
Length: 89
LCHRATSLRVEKDPDLIALGQNLRRLRREANLTQEELASRAGLSANYVGEIERGERNPGALALFAITRGLGVPPATLFEKYRDSDFPA*