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scnpilot_expt_750_bf_scaffold_2629_1

Organism: SCNPILOT_EXPT_750_BF_Sphingomonas_67_7_partial

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 9 / 38
Location: 3..572

Top 3 Functional Annotations

Value Algorithm Source
polysaccharide deacetylase n=1 Tax=Sphingomonas elodea RepID=UPI00026313AA similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 184.0
  • Bit_score: 217
  • Evalue 1.60e-53
Polysaccharide deacetylase {ECO:0000313|EMBL:AJR24693.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium s similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 186.0
  • Bit_score: 211
  • Evalue 9.60e-52
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 183.0
  • Bit_score: 201
  • Evalue 1.50e-49

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Taxonomy

Sphingobium sp. YBL2 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
CGCTGGGCCGAGGATGGGGTGGAGATGTTTCTCCACGGCTACAGCCATCGGGACGAGGCCGAGCATGCTTCCTGGCAGGATCGCGTCAAGGCGAGCCGCATGACGGCGGGCGAAGGGGAATTTCTCGGTCTGGATGCCGAAGAGGCCGAGCGCCGCATCCGTGCCGGCCGGACCCTGATCGAGGACATCACCGGCCGCCCCATTGCCGGCTTCATCGCACCGGCCTGGCTCTACGGCGATGGTGCGCATAGCGCCATGAAGAGGCTCGGCATCGCACTAGCCGAAGACCATATGCGGGTCTGGGCGCCGGATACCGGGCGCATATTCCTCAAGTCTCCGGTGATCACATGGGCAACGCGCACGCGCGCGCGCATGCTCTCGTCGCTCGCCGTCGCCAGCGTCGCCAGGACGATCCCGCTGCCCCGGGTGGTTCGGCTCGGCGTGCATCCGGGCGACGTGACGGTGCCGGCGACGCTTTCGAGCATTCGGCGGACCGTGGCGAAGATCGCACGGACCCATGTCCCCAGCCAGTATCGCGACATGGTCGGAGACCTTGCGTGCGCGTCCTGA
PROTEIN sequence
Length: 190
RWAEDGVEMFLHGYSHRDEAEHASWQDRVKASRMTAGEGEFLGLDAEEAERRIRAGRTLIEDITGRPIAGFIAPAWLYGDGAHSAMKRLGIALAEDHMRVWAPDTGRIFLKSPVITWATRTRARMLSSLAVASVARTIPLPRVVRLGVHPGDVTVPATLSSIRRTVAKIARTHVPSQYRDMVGDLACAS*