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scnpilot_expt_750_bf_scaffold_6399_2

Organism: SCNPILOT_EXPT_750_BF_Sphingomonas_67_7_partial

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 9 / 38
Location: 429..2057

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor, plug n=2 Tax=Sphingomonas wittichii RepID=A5V8G9_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 488.0
  • Bit_score: 449
  • Evalue 4.30e-123
  • rbh
TonB-dependent receptor, plug similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 488.0
  • Bit_score: 449
  • Evalue 1.20e-123
TonB-dependent receptor, plug {ECO:0000313|EMBL:ABQ68585.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.; similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 488.0
  • Bit_score: 449
  • Evalue 6.00e-123

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Taxonomy

Sphingomonas wittichii → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1629
ATGCGACATCATCTCCACGGCACTGCCTGGACGGCACTAGCGCTCGCGACGATCGGCAGCGCCATTCCCTTGGCATCGGCGCGAGCGCAGGCGCACCTGCCGGAGCAATCCAGGCCCCAGGAAGAGGGGGCCGCGTCGCCCGACGAGATCGTGGTCACCGCCAGGAAGCGCAACGAGCGCCTGCAGGATGCGCCGCTCTCCGTGAACGCCGTTTCGGCGGCGGAACTGCGCCAGGGCAATGCCCGCGACTTCAAGGACGTCCTGCGCAAGGTGCCCGGCGTGTCCTTCTCGGGCGCCGAGCTGGGCCAGAGCCGGTACAGCATCCGCGGCGTCAGCACGACTTCGCCAAGCCCCACCGTCGGCATCTATCTCGACGACATATCGCTGCTCGGGGCGACCAATGCCTTCAGCGGCGCGGCCGACCCCGTGTTCTTCGATTTCGGCCGGGTGGAGATCCTCAAGGGGCCGCAGGGGACGCTCTATGGCGGCAGCGCAATGGGGGGCGCGATCAAATATGTCAGCCGCGCGCCGGAACCGGGCAACACCACGCTGGATACCGCGGCGGGCATTTCGAGCACCGCGCATGGCGGCATCTCCTATCAGGGCGAGGCGGTGCTCAATCTGCCGCTGTCCGACAAGCTCGTGCTGCGCACCGGGGCCCTGTATCGCGACAATGCCGGCTTTATCGACAATGTGGCGAACGGAGCCGCCGTCGATGTGCGGACCAGCACGACGGCGCCGCCCGCCGCGCTGACGCCGCTCGTGCGTCCCTCGCTGAGCATGCTGGCCGACAGGAACCAGAATTCCGACCATGTGCTGGCCGTGAAGGCGGCGCTGCTCTGGCAACCCGATCCGTCGCTGGACATCACGCCGGCATTGTTCCGCCAGGCCTATCGGCAGAAGAATAGCGGCGTCTTCTGGACCAATCTTCCCGATCTGCAGAGCTCGTTCCGCCTCGCGCAGCCGACCGACGACGATCTCGGCGTCTATTCGCTGAACATGGTCAAGCATCTGGGCGAGGTCGATATCACTTCGCTCACCGCCTATGTCGATCGGTCGGTCCGCTTCGACCGGGACTATTCCTTCTACATCGCGACGCTGGTTCCCGCGCTGTACGGCGTCAACTCGCCCAACGCGTCGAACAGCAGCACCAGGACGTTCAGCCAGGAGCTGCGGGCGGCGTCGGCCAATCCCGCGGCGCGACTGCGCTGGACCGCCGGCCTCTATTATGCGCGGCAGCGCGACGAACTCGACCAGACCGTCAATTCGATCGGAGTGGGCGCGCTGCTCGGGACCGGCACCGACAAGGTCTATCACGGCAATACCGTCAGCAAGCTGACTCAGTTCGCGGCCTTTGCCGATCTCACCTTCGAGATCCTGCCCGGCCTGGATGCCACCGCCGCGTTGCGCTATTTCAACCTCAGGCAGACGATCGACACCCGCGGCGACGGCGTGCTGAACGGCGGGGCTTCCGCCCCGGCGGCGGCAACCCGTTCGCGGTGGCGCCGGGCCAGTGCCAGGCCGATCTGGCCAATCTCGGCCTGTCCGCGGTGCCGGTCAGCTTTCGTTCGGACTCGCTATGGACCTATGAAGTCGGCAGCAAGAACCAGTTCCTCGGCCGCCGCCTGA
PROTEIN sequence
Length: 543
MRHHLHGTAWTALALATIGSAIPLASARAQAHLPEQSRPQEEGAASPDEIVVTARKRNERLQDAPLSVNAVSAAELRQGNARDFKDVLRKVPGVSFSGAELGQSRYSIRGVSTTSPSPTVGIYLDDISLLGATNAFSGAADPVFFDFGRVEILKGPQGTLYGGSAMGGAIKYVSRAPEPGNTTLDTAAGISSTAHGGISYQGEAVLNLPLSDKLVLRTGALYRDNAGFIDNVANGAAVDVRTSTTAPPAALTPLVRPSLSMLADRNQNSDHVLAVKAALLWQPDPSLDITPALFRQAYRQKNSGVFWTNLPDLQSSFRLAQPTDDDLGVYSLNMVKHLGEVDITSLTAYVDRSVRFDRDYSFYIATLVPALYGVNSPNASNSSTRTFSQELRAASANPAARLRWTAGLYYARQRDELDQTVNSIGVGALLGTGTDKVYHGNTVSKLTQFAAFADLTFEILPGLDATAALRYFNLRQTIDTRGDGVLNGGASAPAAATRSRWRRASARPIWPISACPRCRSAFVRTRYGPMKSAARTSSSAAA*