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scnpilot_expt_750_bf_scaffold_1440_5

Organism: SCNPILOT_EXPT_750_BF_Acidovorax_68_7_partial

near complete RP 47 / 55 MC: 11 BSCG 46 / 51 MC: 10 ASCG 13 / 38 MC: 9
Location: 2998..6462

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=358220 species="Bacteria; Pr similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 999.99
  • Bit_score: 2265
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUU0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 999.99
  • Bit_score: 2265
  • Evalue 0.0
  • rbh
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 999.99
  • Bit_score: 2265
  • Evalue 0.0

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Notes

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Taxonomy

Acidovorax sp. KKS102 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3465
ATGGAACTCCCCAAACTCTCCCCCGGAAAACGCTTTGCCCTGCCCCGCCCCGTGGGCAGTGCCGACTCCCTGCTGCTGGCCCGCCTGGCCGAACGCGACAAGGCCGCCGGCCGTACCACCGCCATCGTCACGGCCGATGCCACCGACGCGCAGCGGCTCATCGACGAGATGGCCTTTTTTGCGCCCGGCCTGCGCTGCGCGCTGTTCCCCGACTGGGAAACGCTGCCCTACGACACGTTCAGCCCGCACCAGGACCTGATCAGCGAGCGGCTGGCCACGCTGTGGCGCATCTCGCAGGGTGAGGCCGATGTGGTGCTGGTGCCCGCCACCACGGCGCTGTACCGCCTTGCCCCGCCGTCCTTCCTGGCGGGCTATACCTTCCACTTCAAGGTCAAACAAAAGCTCGACGAGGCCAAGTTCAAGGCCCAGCTCACGCTGGCCGGTTACTCGCATGTATCTCAGGTCGTGAGCCCTGGCGAATATGCCGTGCGCGGCGGGCTGATCGACCTGTTCCCCATGGGCTCGCTCGTGCCCTTCCGCGTGGATCTGTTCGACGACGAGATCGACAGCATCCGCACCTTTGACCCCGACAGCCAGCGCAGCCTGTACCCCGTGCCCGAGGTGCGCCTGCTGCCCGGCCGCGAATTCCCCATGGACGACGAGGCGCGCGCGAAATTCCGCAGCCGCTGGCGCGAAATGCTGGAGGGCGACCCGACCAAGAGCCGCATCTACAAAGACATGGGCGCAGGCGTGGCCACGGCGGGCATCGAGTACTACCTGCCGCTGTTCTTTGACGACACGGCCACGGTGTTCGACTACCTGGGCGGCGAGGCCACCGTGGTGCTGCACGGCGACCTGGAGCCTGCCTTCCAGCGCTTCTGGCAGGACACCAAGGACCGCTTCCGCCTGGTGCAGGGCGACCCCGAGCGCCCGGCCCTGCCGCCCGAGTCGCTCTTCCTCTCGGCCGACCAGTTCTACACCCGCGCCAAGGAGCATGCCCAGCTGTCCATCCGTCCCGGCGTGGAGGATGTGGATGACAACCCACACTTCCAGAAACTGGGCGACCTGTCAGTGGTGCGCGGCGCCGAGGACCCGCTGGCCCGCCTGCACGCCCACATCCGCAACACCCAGCACCGCGTGCTGCTGCTGGCCGAGAGCGATGGCCGGCGCGAGAGCCTGCTCGACTTTCTGCGCGCCAGCGGGGTGAACCCGCCGGCCTTCGATTCGCTGGCCGAGTTCCAGGGCACGGCCGACGAAAAGGTCGGCATCGCCACCGCCGGCCTCACGGTGGGTTTCAGCTGGATCGAGGACGGCATCGACTTCGTCACCGAGACAGAGCTGTTTGCCGCCGGCCCCACCACGCGCCGGCGCAAGAAGCAGGAGCAGGTGAGCGATGTCGAGGCGCTGATCAAGGACCTGGCCGAGCTGACCTTGGGCGACCCCGTGGTGCACAGCCAGCATGGCATTGGCCGCTACCGGGGCCTGATCAACATGGACGTGGGCAACAAGAACCCCGACGGCACGCCCGCCATGCAGGAGTTCCTGCACCTGGAATACGCCGACAAGGCCGTGCTCTACGTGCCCGTGAGCCAGCTGCAGCTGATCAGCCGCTACACCGGCGTGAGCGCCGACGAGGCGCCGCTGCACAAGCTGGGCAGCGGCCAGTGGGAAAAGGCCAAGCGCAAGGCCGCCGAGCAGGTGCGCGACAGCGCGGCCGAGCTGCTCAACATCTACGCGCGCCGCGCGGCGCGCGAGGGCCATGCCTTCCGTTACAGCCCGCAGGACTACGAGACTTTTGCCAACGACTTCGGCTTCGATGAAACCGCCGACCAGAACGCCGCCATCCACGCGGTGATCCAGGACATGATCAGCCCCCGCCCCATGGACCGCCTGGTCTGCGGCGACGTGGGCTTCGGCAAGACCGAGGTCGCCCTGCGCGCGGCCTTCGTGGCCGTCACCGGGGGCAAGCAGGTGGCCTTCCTCGCGCCCACGACCTTGCTGGCCGAACAGCACTACCAAACCCTGGTGGACCGCTTCAGCAAGTGGCCCGTGAAGGTGGCCGAGGTCTCGCGCTTTCGCTCGGGCAAGGAGATCACCGCCGCCATCAAGGGCATCGGCGACGGCACCGTGGACATCGTGGTGGGCACGCACAAGCTGCTCTCCGAATCCACCAAGTTCCACAACCTGGGCCTCTTGATCATCGACGAGGAGCACCGCTTCGGCGTGCGCCACAAGGAGCAGATGAAGGCCCTGCGCGCCGAGGTGGACGTGCTCACGCTCACGGCCACGCCCATCCCGCGCACGCTGGGCATGGCGCTCGAAGGGCTGCGCGACCTGTCGGTCATCGCCACCGCGCCGCAGCGGCGCCTGGCGATCAAGACCTTCGTGCGCAACGAGGGCACGGGCGTGATCCGTGAAGCCGTGCTGCGTGAATTGAAGCGCGGCGGGCAGGTCTACTTCCTGCACAACGAGGTGGAGACCATCGAGAACCGCCGCCAGAAGCTCGAAGAGATCCTGCCCGAGGCCCGCATCGCCGTCGCCCACGGGCAGATGCCCGAGCGCGAACTGGAGCGCGTGATGCGCGACTTCGTGGCCCAGCGCTTCAACATTTTGCTGTGCTCGACCATCATCGAGACCGGCATCGACGTGCCCACGGCCAACACCATCATCATGAGCCGTGCCGACAAGTTCGGCCTGGCGCAGCTGCACCAGCTGCGCGGCCGCGTGGGCCGCAGCCACCACCAGGCGTACGCCTACCTCATGGTGCCCGACGTGGATGGCCTGACCAAGCAGGCACAGCAGCGGCTCGAAGCCATCCAGCAGATGGAGGAACTGGGCAGCGGCTTTTACCTGGCCATGCACGACCTGGAGATCCGCGGTGCAGGCGAGGTGCTGGGCGAGAACCAGAGCGGCAACATGCTCGAAGTCGGCTTCCAGCTCTACAACGAGATGCTGAACGAGGCCGTCAAGGCGCTCAAGGCGGGCAAGGAGCCCGACCTGCTCTCGCCCCTGTCCGTCACCACCGACATCAACCTGCACGCCCCCGCTCTGCTGCCCGACGACTACTGCGGCGACGTGCACCTGCGCCTGTCGTTCTACAAGAAGCTGGCCACGGCCAAGACCCCCGACCAGATCGACGGCCTGCTCGAAGAGATCGTGGACCGCTTCGGCAAGCTGCCGCCGCAGGCCCAGACCCTGATCGACGTGCACCGCCTGCGCGTGCTGAGCCAGCCCTACGGCGTGGTGAAGGTCGATGCCGCTCCGGGCGTCATCAACATCACCTTCAAGCCCCAGCCGCCCATCGACCCGATGCGCATCATTGAACTGATTCAGAAGAACAAGCACATCAAGCTGGCGGGCAACGAGAAGCTGCGCATCGAGCGCGAGCTGAAGGAGCCCAAGGACCGCGCACAGATGGTGCGCGACATTCTGCGCAGCCTGGGGCAACCCGTGGTGGCTGCATAG
PROTEIN sequence
Length: 1155
MELPKLSPGKRFALPRPVGSADSLLLARLAERDKAAGRTTAIVTADATDAQRLIDEMAFFAPGLRCALFPDWETLPYDTFSPHQDLISERLATLWRISQGEADVVLVPATTALYRLAPPSFLAGYTFHFKVKQKLDEAKFKAQLTLAGYSHVSQVVSPGEYAVRGGLIDLFPMGSLVPFRVDLFDDEIDSIRTFDPDSQRSLYPVPEVRLLPGREFPMDDEARAKFRSRWREMLEGDPTKSRIYKDMGAGVATAGIEYYLPLFFDDTATVFDYLGGEATVVLHGDLEPAFQRFWQDTKDRFRLVQGDPERPALPPESLFLSADQFYTRAKEHAQLSIRPGVEDVDDNPHFQKLGDLSVVRGAEDPLARLHAHIRNTQHRVLLLAESDGRRESLLDFLRASGVNPPAFDSLAEFQGTADEKVGIATAGLTVGFSWIEDGIDFVTETELFAAGPTTRRRKKQEQVSDVEALIKDLAELTLGDPVVHSQHGIGRYRGLINMDVGNKNPDGTPAMQEFLHLEYADKAVLYVPVSQLQLISRYTGVSADEAPLHKLGSGQWEKAKRKAAEQVRDSAAELLNIYARRAAREGHAFRYSPQDYETFANDFGFDETADQNAAIHAVIQDMISPRPMDRLVCGDVGFGKTEVALRAAFVAVTGGKQVAFLAPTTLLAEQHYQTLVDRFSKWPVKVAEVSRFRSGKEITAAIKGIGDGTVDIVVGTHKLLSESTKFHNLGLLIIDEEHRFGVRHKEQMKALRAEVDVLTLTATPIPRTLGMALEGLRDLSVIATAPQRRLAIKTFVRNEGTGVIREAVLRELKRGGQVYFLHNEVETIENRRQKLEEILPEARIAVAHGQMPERELERVMRDFVAQRFNILLCSTIIETGIDVPTANTIIMSRADKFGLAQLHQLRGRVGRSHHQAYAYLMVPDVDGLTKQAQQRLEAIQQMEELGSGFYLAMHDLEIRGAGEVLGENQSGNMLEVGFQLYNEMLNEAVKALKAGKEPDLLSPLSVTTDINLHAPALLPDDYCGDVHLRLSFYKKLATAKTPDQIDGLLEEIVDRFGKLPPQAQTLIDVHRLRVLSQPYGVVKVDAAPGVINITFKPQPPIDPMRIIELIQKNKHIKLAGNEKLRIERELKEPKDRAQMVRDILRSLGQPVVAA*