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scnpilot_expt_750_bf_scaffold_1723_9

Organism: SCNPILOT_EXPT_750_BF_Acidovorax_68_7_partial

near complete RP 47 / 55 MC: 11 BSCG 46 / 51 MC: 10 ASCG 13 / 38 MC: 9
Location: comp(9264..10370)

Top 3 Functional Annotations

Value Algorithm Source
Transcription regulator GntR family n=1 Tax=Ralstonia solanacearum SD54 RepID=V4ZT30_RALSL similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 363.0
  • Bit_score: 278
  • Evalue 8.90e-72
Transcription regulator GntR family {ECO:0000313|EMBL:GAO20642.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicy similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 368.0
  • Bit_score: 712
  • Evalue 3.40e-202
putative transcriptional regulator, GntR family similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 367.0
  • Bit_score: 252
  • Evalue 1.90e-64

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
ATGCGCGAGCCTATCGACCTCACTTCCACGTGGCCGCCGAACCTGGAGATCGCATCGACGCTGGCGGCCGCGGTGGCGCGGCTGACCGGCGACCGCAGCTTTGACTTCCTGGCACGTCGCGCCGGCACGGTGCCGGCGCTGGACCTCGCGGCCGGCCGCGACTGGCTGCAGCCGCGCTTCGACCTGGAGGTGGGCGGCCGCCTGGCCATGGCCTCGGGCGCGCGCAACGCACTGATCGGCTTGCTGTCCAGCCTCGTGGGAACCGGCGGCCGGCTGCTGGTGGAAGCGATGTGCTGGCCGACCATGCGCACCCTGGCCACGGTGCTGGGCATCGAACTCGTGCCGGTCGCGCTGGACGCCGAAGGCATCCTGCCGGACGCCCTGGACGCCGCGGCGCAGGCGTCGCAGGCCACGGTGCTGTACTGCGTGCCGACGCTGCAGAACCCGAGCGGCGCGGTGATGGGCCTGCGCAGGCGCCGCGCGCTCGTCGAGGTCGCGCGCCGGCGCGGCCTCACCCTCGTGGAGGACGATGCCTACGGCGGCCTGCACCGCGACCCGCCCCCGCTGCTGGGCACGCTGGCCCCGGAACTCACCTATTCGGTCTTCGGGCTGGCAAAGCTCATCTCGCCCAGCCTGCGCGTCGCCTACGTCGTGGCGCCGGATGCCGAGAAGGCCGAGCGCCTCGCGGAGATCCTGCGCGCCACCATGCAGACAGTCCCGCCGCTGGAGGCGGCGCTGGCCACGCACCTGATCCGCCATGGCCAGATGGCCAAACTGATCAAGCAGGTCCGCACGGAGGCGCAGGAGCGCCAGGGGCTGGCCCGGCAGCTGCTGGGGGAACACGCCGCGCACGTACCGGACGAGGCGCTGTTCTTCTGGCTGCCGCTGCCCGTCCCCTGGGACGCGTCGGACTTCGCGATGCGGCTGCGGCGAGCGGGCGTGGTGGTGGCGCCGGCCAAGGTCTTCTCGCTCGACCCGGCCTCGGCGCCCAACGCCGTGCGCATCGCCACCGGCGCGGTCCCGTCGCGGGAAGACGTCACCATCGCCCTGCAGCGTGTGCGGGGGCTGCTGGCGCAGAATCCCTCTCTGCTCAGCGTGATCGACTGA
PROTEIN sequence
Length: 369
MREPIDLTSTWPPNLEIASTLAAAVARLTGDRSFDFLARRAGTVPALDLAAGRDWLQPRFDLEVGGRLAMASGARNALIGLLSSLVGTGGRLLVEAMCWPTMRTLATVLGIELVPVALDAEGILPDALDAAAQASQATVLYCVPTLQNPSGAVMGLRRRRALVEVARRRGLTLVEDDAYGGLHRDPPPLLGTLAPELTYSVFGLAKLISPSLRVAYVVAPDAEKAERLAEILRATMQTVPPLEAALATHLIRHGQMAKLIKQVRTEAQERQGLARQLLGEHAAHVPDEALFFWLPLPVPWDASDFAMRLRRAGVVVAPAKVFSLDPASAPNAVRIATGAVPSREDVTIALQRVRGLLAQNPSLLSVID*