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scnpilot_expt_750_bf_scaffold_2431_7

Organism: SCNPILOT_EXPT_750_BF_Acidovorax_68_7_partial

near complete RP 47 / 55 MC: 11 BSCG 46 / 51 MC: 10 ASCG 13 / 38 MC: 9
Location: comp(4968..5264)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbE n=1 Tax=Thiobacillus denitrificans RepID=UPI000365D4CA similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 98.0
  • Bit_score: 165
  • Evalue 3.90e-38
conjugal transfer protein TrbE similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 97.0
  • Bit_score: 175
  • Evalue 6.10e-42
Conjugal transfer protein TrbE {ECO:0000313|EMBL:AJP47674.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1 similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 97.0
  • Bit_score: 175
  • Evalue 3.00e-41

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Taxonomy

Rhodocyclaceae bacterium PG1-Ca6 → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 297
GTGATCTACGAGGGCTTCGGGCTCAACGGGCGGCAGATCGAGATCGTCGCCACGGCGCAGCCCAAGCGGGACTACTACTACCAGTCGCGGCTGGGCAACCGGGTCTTCGACCTCGGGCTGGGGCCTGTGGCGCTGGCCTTTGCGGGGGCGTCGTCGCCCGAGGATCAGCGGGCTATAGATGCCGTCTTCGCTGCCGTTCCACCTTCGGACTTCGCGACCGCCTGGCTGCGCCGTCGCGGCCTGGATTGGGCGGCCGGCCTCATCCCTTCGTTTCCACCGTTGCCATCCATCACCTGA
PROTEIN sequence
Length: 99
VIYEGFGLNGRQIEIVATAQPKRDYYYQSRLGNRVFDLGLGPVALAFAGASSPEDQRAIDAVFAAVPPSDFATAWLRRRGLDWAAGLIPSFPPLPSIT*