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scnpilot_expt_750_bf_scaffold_3987_2

Organism: SCNPILOT_EXPT_750_BF_Acidovorax_68_7_partial

near complete RP 47 / 55 MC: 11 BSCG 46 / 51 MC: 10 ASCG 13 / 38 MC: 9
Location: comp(1028..2239)

Top 3 Functional Annotations

Value Algorithm Source
extracellular ligand-binding receptor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 400.0
  • Bit_score: 619
  • Evalue 3.30e-174
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein id=12553271 bin=BDI species=Acidovorax ebreus genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 401.0
  • Bit_score: 610
  • Evalue 1.40e-171
  • rbh
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 387.0
  • Bit_score: 569
  • Evalue 7.80e-160

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
ATGAACACCACGCACCCCACCCGCAGCCGCGCCCGGCGCGTCCTGCTGGCCCTGTGCGCCGCCTTGCCGCTGTGGGCCGCCGCCCAGGCGCCCGAACCCGTCAAGCTCGGCGTGATCGGGCCGTTTTCCGGCCCCTCGTCGGATTTCGGCACGCCCATGCTGCAAGGCATCCAGCTGGCCGTGGACGAGATCAACGCCGTCGGCGGCTACCTCGGCCGCCCGCTGGAGCTCGTCGTGCGCGACGACCAGGGCACGCCGGATGTCGGCCTCAAGGCCTCGCAGGAACTCGTCGCCGCTGGTGTGCTGGGAACCGTGGGTTTCTGCAACACCGGCGTGGCGCTCAAGTCCATCGACGTGTTCCAGAACGCCAAGGTGCCGCTCATCGTGCCGTGCTCCACCGGCACGCCGGTGACGTCCAAGTACCCGATGGCCGAGAGCTACATCTTCCGCAATTCGGCGCGGGACTCCATCCAGGCGCCGTTCGTCGTGGCCGACCTGGTCAAGCGCGGCTGGACCAAGGTCGCCGTCTTCGCGGACACCACCGGATACGGCGAGGCCGGCCTGCAGGACGTGCAGGCGGCGCTCGCCGCGCACAAGCTGCAGGCGGTGAACGTGACGCGCTTCCCGCTCGGCGTGACCGACCTGCGCGAGGAGCTCAAGGTGGCACGCGACGCCGGCGCCAACGTGGTCTTCAGCTACACCGTGGGGCCGGAAAACGCCGCCATCGCCCTGGGCCGGCGTGACATCGGCTGGAAGGTGCCACAGGTAGGCGCCTGGCCACTGTCCTTCCCGTTCTTCATCGACGTGGCCAAGGACGCGGGCGAGGGCGCCCTGATGGCGCAGACCTTCATCGCCGAGCCGAGCAACGAGCGGCGTGCGGCCTTCCTCAGCGCCTACACGCGCAAGTGGGGCAAGAAACTGGTCGTGCCCATGGCGGCGGCGCAGGGCTACGACGCGGTCTACCTGTTCACCTACGCGCTCCTGGGCATCCGCGATGGCAAGCTGAGCGGCCCGGCGATGAAGACCGCGCTTGAAAACATCCAGCGCGTGTACTACGGCGTGGTCGCCACCTACGAGCACCCCTTCAGCGACAAGGACAAGGACGCCATCACGGCCAACATGCTGGTCATGGGCAAGGTGCAGGCCGGCGGCGTGACCTTCGCCTACCCCGAGGATGCGCGGCGCAACCTGATCGTGCAGCGCAAGAAGTAG
PROTEIN sequence
Length: 404
MNTTHPTRSRARRVLLALCAALPLWAAAQAPEPVKLGVIGPFSGPSSDFGTPMLQGIQLAVDEINAVGGYLGRPLELVVRDDQGTPDVGLKASQELVAAGVLGTVGFCNTGVALKSIDVFQNAKVPLIVPCSTGTPVTSKYPMAESYIFRNSARDSIQAPFVVADLVKRGWTKVAVFADTTGYGEAGLQDVQAALAAHKLQAVNVTRFPLGVTDLREELKVARDAGANVVFSYTVGPENAAIALGRRDIGWKVPQVGAWPLSFPFFIDVAKDAGEGALMAQTFIAEPSNERRAAFLSAYTRKWGKKLVVPMAAAQGYDAVYLFTYALLGIRDGKLSGPAMKTALENIQRVYYGVVATYEHPFSDKDKDAITANMLVMGKVQAGGVTFAYPEDARRNLIVQRKK*