ggKbase home page

scnpilot_expt_750_bf_scaffold_4916_9

Organism: SCNPILOT_EXPT_750_BF_Acidovorax_68_7_partial

near complete RP 47 / 55 MC: 11 BSCG 46 / 51 MC: 10 ASCG 13 / 38 MC: 9
Location: comp(6757..7701)

Top 3 Functional Annotations

Value Algorithm Source
MiaB family RNA modification protein; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA id=12552542 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 315.0
  • Bit_score: 589
  • Evalue 1.50e-165
MiaB family RNA modification protein; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 314.0
  • Bit_score: 588
  • Evalue 4.80e-165
MiaB family RNA modification protein similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 312.0
  • Bit_score: 572
  • Evalue 7.20e-161

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATCGAGAAGTTCGACCACCTGCCGCCCGCCCGTGTGGAGGGTGCCAGCGCCTTCGTCTCCATCATGGAAGGCTGCAGCAAGTACTGCAGCTACTGCGTGGTGCCCTACACTCGCGCCGAAGAGATCAGCCGCCCCTTCGACGACATCCTGGTGGAAGTGGCCGGCCTGGCCGACCAGGGCGTGAAGGAGATCACCCTGCTGGGCCAGAACGTGAACGCCTACCGCGGCGCCATGGGCGGCACCAGCGAGGTGGCCGACCTGGCGCTGCTGCTCGAATACGTGGCCGACATCCCCGGCATCGAGCGCCTGCGCTTCACCACCAGCCACCCCAACGAGTTCACGCCACGCCTGATCGAGGCCTACGCCAACATTCCCAAGCTGGCCAACCACCTGCACCTGCCGGTGCAGCATGGCTCGGACCGCATCCTCATGGCCATGAAACGCGGCTACACCGCCATGGAATACAAGAGCACGGTGCGCAAGCTGCGCGCCATCCGCCCCGACCTGGCCATGAGCAGCGACTTCATCGTCGGCTTCCCCGGCGAGACGGAAGAAGACTTCGCCAAGATGATGAAGCTCATAGCCGACATCCACTTCGACAACTCGTTCAGCTTCATCTTCAGCCCGCGCCCCGGCACCCCCGCCGCCAACCTGCACGACGACACTCCGCACGAGGTCAAGCTGCGCCGCCTGCAGGAGCTGCAGGCCGTGATCAACGGCAACATCAAGTCCATCAGCGAGGGCCTGGTGGGCAAGGTGCAGCGCATCCTGGTCGAGGGTGCTTCCAAGCGCGACGAGAACGAACTCATGGGCCGCACCGAATGCAACCGCGTGGTCAACTTCGCTGGCGGCCAGCGCCTGGTGGGCCAGATGGTGGACGTGACCATCACCGAGGCCAAGGCCTACACGCTGCGCGGCGAGGTGCTGACCCGCGATCCAGCCTGA
PROTEIN sequence
Length: 315
IEKFDHLPPARVEGASAFVSIMEGCSKYCSYCVVPYTRAEEISRPFDDILVEVAGLADQGVKEITLLGQNVNAYRGAMGGTSEVADLALLLEYVADIPGIERLRFTTSHPNEFTPRLIEAYANIPKLANHLHLPVQHGSDRILMAMKRGYTAMEYKSTVRKLRAIRPDLAMSSDFIVGFPGETEEDFAKMMKLIADIHFDNSFSFIFSPRPGTPAANLHDDTPHEVKLRRLQELQAVINGNIKSISEGLVGKVQRILVEGASKRDENELMGRTECNRVVNFAGGQRLVGQMVDVTITEAKAYTLRGEVLTRDPA*