ggKbase home page

scnpilot_expt_750_bf_scaffold_9254_7

Organism: SCNPILOT_EXPT_750_BF_Acidovorax_68_7_partial

near complete RP 47 / 55 MC: 11 BSCG 46 / 51 MC: 10 ASCG 13 / 38 MC: 9
Location: 3823..5307

Top 3 Functional Annotations

Value Algorithm Source
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=2 Tax=Alicycliphilus denitrificans RepID=E8TWM5_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 500.0
  • Bit_score: 727
  • Evalue 1.30e-206
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 497.0
  • Bit_score: 767
  • Evalue 1.60e-218
tRNA u-34 5-methylaminomethyl-2-thiouridine biosynthesis protein mnmc similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 500.0
  • Bit_score: 727
  • Evalue 3.60e-207

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1485
ATGACCCCCCCGATGGACTGGTTGCCCGACGGCACACCCTACAGCCCGCGCTTTGGCGACCGCTACCACAGCGAGCAGCCGCTCGCGCAGGCGCGCGAGGTCTTCCTGCACGGCTGCGGCCTGCCGGGCGCCTGGGCCGGCGCGGCGCAGTGGCGCATCCTGGAAACCGGCTTCGGCCTGGGGCTGAACTTCCTCGCCACCTGGGACGCCTGGCGCGCCGACCCGGACCGCCCCCGCCTGCTGCATTTCGTCTCGCTGGAAGCCTGGCCGGTCTCCAGTACCGACCTGCTGCGCGCGGCCACGCGCTACCCCGAGCTGCTGCCGCTCGCAGAGCAGCTGGCGGCCCAGTACTGGGGCCTGCTGCCGGGCGTGCACCGCCTGTGGTTCGAAGGCGGCCGCGTCTTGCTGACGCTGGCCATCGGCGACGCCCAGGCGCTGCTGCGCCAGCAGCACTGGGAGGCGGACGCGGTGTACCTCGACGGTTTCAGCCCCGAGCACAACCCCGAGCTCTGGAGCGCGCACACGCTCAAGGCCCTGGCGCGCTGCTGCCACCGCGGCACCCGCCTGGCCACCTGGTGCGTGGCCGGCACGGTGCGCGCCGCGCTCGCGCAGTGCGGCTTCCAGGTCGAGAAGGTGCCGGGCACGCCGCCCAAGCGGCACAACCTGCGCGCGCGCTTCGACCCCGCCTGGGAGCCGCGCCCCGCCCGCGCCGCTGCCCCCACGGCGCTGCCGGGGCCCGCACGCTGCATCGTCATCGGTGCCGGGGTCGCGGGCGCGGCCAGCGCGGCCAGCCTGGCGCGGCGGGGCTGGCAGGTGCAGGTGCTGGACGCCGCCGACGCACCGGCCAGCGGGGCGTCGGGCCTGCCGGTGGGCCTGTTCGCGCCGCACCTCTCGCCCGACGACAATTTCTTCTCGCGCGTCTCACGCAGCGGCGTGCGCGCCATGCTGCAGCAGTGCGGCGAACTCCTGGAGCCGGGCGTGGACTGGCAGGCCAGCGGCGTGCTCGAACGCCGCCCGCCGGGCCACCTGGGCCTGCCCGCCGACTGGCCGGACGGCCCCGGCACCGACTGGAGCCACGCCGCCGCGCCCGAGCTGCTGCAGCGCGCCGGGCTGGCACCGGACACCCCCGCCTGCTGGCATGCGCGCGCCGGCTGGGCACGCCCCGCCCGGCTGGTGGCCGCACTGCTGGCCCAGCCCGGCATCGCCTGGTGCCCCGGCAGCCGCGTGGCGCGGCTGGAACGCGTGGATACCGTCGCCGCCGGCACGGCGCCGCTCTGGCACGCCATCGGCGCCGACGGCAAAGCGCTCGCGCGCGCCGAACTCGTGGTGCTGGCGGCCGGGCCGGCGTGCAATGCGCTGCTGGCGGGCGTGGTGGCCGCGCCGCTGCCGCTGCAGTCGGTGCGCGGGCAACTCTCCTGGGGCGTGCAGGGCGCCGAGGCGGACGGCCTCCCGCCCTTCCCGGTGAACGGCCAGGGCGCCCTGGTG
PROTEIN sequence
Length: 495
MTPPMDWLPDGTPYSPRFGDRYHSEQPLAQAREVFLHGCGLPGAWAGAAQWRILETGFGLGLNFLATWDAWRADPDRPRLLHFVSLEAWPVSSTDLLRAATRYPELLPLAEQLAAQYWGLLPGVHRLWFEGGRVLLTLAIGDAQALLRQQHWEADAVYLDGFSPEHNPELWSAHTLKALARCCHRGTRLATWCVAGTVRAALAQCGFQVEKVPGTPPKRHNLRARFDPAWEPRPARAAAPTALPGPARCIVIGAGVAGAASAASLARRGWQVQVLDAADAPASGASGLPVGLFAPHLSPDDNFFSRVSRSGVRAMLQQCGELLEPGVDWQASGVLERRPPGHLGLPADWPDGPGTDWSHAAAPELLQRAGLAPDTPACWHARAGWARPARLVAALLAQPGIAWCPGSRVARLERVDTVAAGTAPLWHAIGADGKALARAELVVLAAGPACNALLAGVVAAPLPLQSVRGQLSWGVQGAEADGLPPFPVNGQGALV