ggKbase home page

scnpilot_expt_750_bf_scaffold_840_18

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_63_6_partial

megabin RP 44 / 55 MC: 15 BSCG 44 / 51 MC: 12 ASCG 9 / 38 MC: 2
Location: 13974..14675

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI0003026509 similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 235.0
  • Bit_score: 357
  • Evalue 1.20e-95
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36182.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717 similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 236.0
  • Bit_score: 350
  • Evalue 1.60e-93
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 231.0
  • Bit_score: 274
  • Evalue 2.30e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGGCAAAACTTCCGCTCATCGACATTCGCCCGGCCGATAAATCCAGCCGCTCCCGGAAGACGACGCCAAGCCGTGCGTCCGCCGCACGTCCCACCAAGCGCGCGATCGGCGCCACCGAGCGCCGCGCGGCCATCGTGGCGGCCGGTCTTGATGAATTCACCGCCAAGGGATTCGCGGCGACGCGCCTCGACGATGTGGCCAAACGCGCCGGCGTCGCCAAGGGCACGATCTATCTGCACTTCAAGGACAAGGAAGCGCTGTTTCAGGAACTGGTGCGCACGGCGCTAGGCCCGCTGGTCCTGAGAGTCTCAAATCCTCCGATCGGCGAGGGAGCAGCTTCGGCGCGCGCGCTGATGGAAGGCTTGGCGGACATGTTCGTGCGCGAGGTGATCGGCACCAGGCGCGGCGACATCCTGCGCCTGATTATTTCAGAAGGCGGGCGCTTCCCTGTGCTTTCGGACTTCTACTACAACGAAGTCATTGCCCACGGTATCGTCGGAATGCGCAAGCTGATCGACTACGGCGTGGCGCGCGGCGAAATCCGCAATCCCCATGTGGCCGAATTTCCGCAACTGATCGCTGCGCCGCTCGTTGTCGCTGTGATCTGGCAGGGCCTGTTCGCCAAGCACCAGCCGCTCGATTTTGCGGCGATGCTGCGGGTTCATCTCGATCTGATTTTTAATGAAGGGAAAGCGGCATGA
PROTEIN sequence
Length: 234
MAKLPLIDIRPADKSSRSRKTTPSRASAARPTKRAIGATERRAAIVAAGLDEFTAKGFAATRLDDVAKRAGVAKGTIYLHFKDKEALFQELVRTALGPLVLRVSNPPIGEGAASARALMEGLADMFVREVIGTRRGDILRLIISEGGRFPVLSDFYYNEVIAHGIVGMRKLIDYGVARGEIRNPHVAEFPQLIAAPLVVAVIWQGLFAKHQPLDFAAMLRVHLDLIFNEGKAA*