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scnpilot_expt_750_bf_scaffold_3410_1

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_63_6_partial

megabin RP 44 / 55 MC: 15 BSCG 44 / 51 MC: 12 ASCG 9 / 38 MC: 2
Location: comp(177..728)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JE04_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 175.0
  • Bit_score: 195
  • Evalue 3.80e-47
rimM; ribosome maturation factor rimM similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 175.0
  • Bit_score: 195
  • Evalue 1.10e-47
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; H similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 175.0
  • Bit_score: 195
  • Evalue 5.30e-47

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGCCGGGCAGGCCAGGCGACGAGGATCGGGACGGGCGCATTCTGCTTGGCCGGATCGTCGCCGCACATGGCGTGCGCGGCGAGGTGCTCGTGCGCTCCTATGCCGACGATCCGGCGGCGATCGGTGCCTATGGGCCGCTCGCCGCGCCGGCGGCCAATCGCACGCTCGAGCTGCGCGTGCTGCGCGTGACGGCCAAGGGGGTCGTCGCGCGGATTGCCGGCATCAGCGATCGCAATGCTGCCGAGGCTCTGGCTGGGATCGACCTCTACATCGATCGCGCGCAGCTCCCGGCGGCCGGTGAAGACGAGTTCTATCACGCCGACCTGATCGGGCTCGCCGCCGTCGCCCCCGATGGCGCGGAGATCGGCCGCGTCGTGGCCGTTCACAATTTCGGTGCCGGTGATTTGATCGAGGTCGCTCTTGCGGCCTCGCGGCGTACCGAGCACATACCCTTCAATGATCGCTTCGTGCCTGAGGTCGACGTGGCTGCGGGCAGGATCGTGGTCAGCTTGCCGGAGCCCTCCGACGAGGACGGGCCTCCACAAGGGTAA
PROTEIN sequence
Length: 184
MPGRPGDEDRDGRILLGRIVAAHGVRGEVLVRSYADDPAAIGAYGPLAAPAANRTLELRVLRVTAKGVVARIAGISDRNAAEALAGIDLYIDRAQLPAAGEDEFYHADLIGLAAVAPDGAEIGRVVAVHNFGAGDLIEVALAASRRTEHIPFNDRFVPEVDVAAGRIVVSLPEPSDEDGPPQG*