ggKbase home page

scnpilot_expt_750_bf_scaffold_3685_4

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_63_6_partial

megabin RP 44 / 55 MC: 15 BSCG 44 / 51 MC: 12 ASCG 9 / 38 MC: 2
Location: comp(1444..2442)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JTB4_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 315.0
  • Bit_score: 500
  • Evalue 1.70e-138
Fis family two component sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 315.0
  • Bit_score: 500
  • Evalue 4.80e-139
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADJ24432.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiacea similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 315.0
  • Bit_score: 500
  • Evalue 2.40e-138

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGTCCAAGCGCGTCCTCGTCGTCGATGACGACCCCGCTCAGCGCCGCATCCTTGAAGAAATGATCAAGCGGTTGGGCTACGACGCCCGCACCGCACAGGGCGGCGAGCACGCCCTCCAGATCCTCGAAGGCCCCGAAGGCCCCTCGATCTCCATCGTCCTCCTCGACCTCGTCATGCCCGGCACCGACGGCATGACCGTGCTCGAGCGCCTCGGCTCGAAGCCCGGTACCCCGCCGATCATCGTGCAGACCGCCAATGGCTCGATCGAGGCCGCCATCGGCGCCATGCGCGCTGGCGCCGCCGATTTCGTCGTCAAGCCGGCGAGCCAGGAGCGGCTCGACGTCTCGATCAAGAGCGCGCTCAAGATCGAGGCCCTGCAGGGCGAGATCACGCGCATCAAGAGGAAGGTCGAAGGCACGCTGACCTTCAACGACCTCGTCATGCGCGGCGACGTCATGCACAAGGTCATCGCGCTCGGCCGCCGTGCGGCAGCCTCCAACATCCCCGTTCTCATCGAGGGCGAGTCCGGCGTCGGCAAGGAGCTGATCGCGCGCGCCATCCAGGGCGAGAGCGAGCGCGTCGGCAAGCCGTTCGTCACCGTGAACTGCGGCGCCATCCCCGAGAATCTGGTCGAAAGCATTCTCTTCGGCCATGAGAAGGGCTCGTTCACCGGCGCCGTCGACAAGCGCATCGGCAAGTTCCAGGAAGCCGACGGCGGCACGCTCTTCCTCGACGAGGTCGGCGAGCTTCCGCTCGATGCCCAGGTCAAGCTGCTGCGCGCGCTGCAGGAAGGCGAGATCGATCCGGTCGGCTCGAAGAAGAGCCTCAAGGTGAACTTCCGCCTGATCTCGGCGACGAACCGCGACATGATCCAGCTCGTCAAAGAAGGGAAGTTCCGCGAGGACCTCTACTATCGCGCCATTTCCTCGCCCGCTTCGCGGCCGAGGAAGGCAAGCGGATCACCTCGATCAGCAGCGACGCCATGGACATGCTGGTGA
PROTEIN sequence
Length: 333
MSKRVLVVDDDPAQRRILEEMIKRLGYDARTAQGGEHALQILEGPEGPSISIVLLDLVMPGTDGMTVLERLGSKPGTPPIIVQTANGSIEAAIGAMRAGAADFVVKPASQERLDVSIKSALKIEALQGEITRIKRKVEGTLTFNDLVMRGDVMHKVIALGRRAAASNIPVLIEGESGVGKELIARAIQGESERVGKPFVTVNCGAIPENLVESILFGHEKGSFTGAVDKRIGKFQEADGGTLFLDEVGELPLDAQVKLLRALQEGEIDPVGSKKSLKVNFRLISATNRDMIQLVKEGKFREDLYYRAISSPASRPRKASGSPRSAATPWTCW*