ggKbase home page

scnpilot_expt_750_bf_scaffold_3091_6

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_63_6_partial

megabin RP 44 / 55 MC: 15 BSCG 44 / 51 MC: 12 ASCG 9 / 38 MC: 2
Location: comp(4717..7656)

Top 3 Functional Annotations

Value Algorithm Source
RND multidrug efflux transporter n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QN57_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 784.0
  • Bit_score: 877
  • Evalue 1.20e-251
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EKS39986.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia. similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 784.0
  • Bit_score: 877
  • Evalue 1.60e-251
mdtC; multidrug ABC transporter similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 811.0
  • Bit_score: 854
  • Evalue 3.00e-245

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2940
ATGAACTTCTCCCAGCCCTTCATCGAGCGGCCGATCGGCACCATCCTCCTTGCGATCGGGCTGGTGCTGCTCGGCTGCGTGGCCTATCGCTTCCTCCCTGTCGCGAGCATGCCCTCGGTCGAGTTCCCGACCATTCGCGTCACTGCCAGCCTGCCGGGGGCCGATCCCGAGACCATGGCGGCGCGCGTGGCCGCGCCGCTCGAGCGGCGGCTCGGTGAGATCCCCGGCGTTACCGAGATCACCTCGACGAACGCGCTCGGCAGCACGCGCATCGCCATCCAGTTCGCGCTCAACCGCAGCATCGAGGGTGCAGCCCAGGACGTGCAGGCCGCCATCAACGCGGCCGCTGCCGAACTGCCGGCCGACATGCCCTCGCTGCCCAGATTCCGAAAGTCGAACCCGGCCGCGGCGCCGATCCTGATCCTCGCGCTCACATCCCAGACCATCGCGGCGAGCGACATGTACGATGCCGCTGACACCGTCATCGCGCAGCGCATCTCGCAGATCGACGGCGTTGCCGAGGTGACCATCGCCGGTGCCGAGCAGCCCGCCATCCGCATCCGCGTCAATCCCCGCCAGCTCGCAGCCATGAACATGAGCATCGAGACTGTGCGCTTGGCGATCACGCGCGCCAACGCCGTTGCCCCGCTCGGCATCATCGACGGCGACCGCAATGTCATCGCGCTGGAGGCGAACAGCCAGCTCCGCAGCGTCGAGGACTACGAGAGCATCATCGTCAAGTCGGTTGCTGGCGGTGCCGTCGTGCGTCTCAAGGACGTGGCCACTGTCGAGCAAAGCACGCGCAACTCGCGCTCGCAGGCCATGTTCAACGGGCGGCCGGCGATCCTTCTCACCATCGTCAAGAGCGCCGATGCCAACGTCATCGAAACGGTCGACCGCGTTCTCGAGCTAATGCCCGAGATCAAGTGGTGGGTGCCGGCAGGCATGGAGCTTTCCGTGCTCTCCGATCGCACGGCGACGCTGCGGGCCAGCGTTCACGACATGCAGATCACGCTCGGGCTGTCCATCGCGCTGGTGATGGTGGTGGTCTACGTCTTTCTGCGCCGGCCGACGCCGACCATCGCTGCAGGCGTCACCGTGCCGCTGTCGCTGGCCGGCACCTGCGCCGCCATGTGGCTCGCCGGCTTCTCGATCAACAACCTGACGCTGATGGCACTCGCTGTCTCGGTTGGTTTCGTCGTCGACGATGCCATCGTCATGATCGAGAACGTGTTCCGCAATCTCGAGAAGGGCTGGTCGCCGATGCGTGCGGCGCTGGAGGGCGCCCGGCAGATCGGCTTTACGGTCGTCTCCATCAGCATCTCGCTCATTGCCGCCTTCATCCCGTTGCTGTTCATGAACGACGTGACGCCGATGATCTGCGCGCATTTCGTGCGCTCGCCGCCGAGCCCCAACGCCACCTGGCTCGACCGTATCGTCGAAACGGTGTTCGGCTGGGCCCTGCGCATCTACACGGTCACGCTGACCATCGCCATCCGCCACAAGGTGGTGATGCTGGCCACCTTGATCGCCACGGTGGTGCTTACGGCGGATCTCTACATCAAGAGCCCGAAGGGCTACTTTCCGCGCGACGATACCGGCTTGATCTTCGCGGGGACGCGCGCTCACACCGATACGTCCTTCGATACGATGGCGAGGCTCCAGCAGCAGGCGCTCGACATCGTGCTGGCCGATCCCGCCGTCGCCAATGTCGGCTCCTCGGTCGGCGCGTCGGGCTTCAGCGCCTCGGCCAATCGCGGCCGCATGTTCATCAGTCTGAAGCCGCTCGCTGAGCGGAACAATCTGCCGACCGCCCGCGTCATCGACCGGCTGCGCCGCGAGCTTTCGCAGGTGAGGGGCCTCGGTGTCTTCCTGGCCGCCGCGCAGGACATCCGCACGGGCGCGCGGCAGGCCGATTCAGACTATCAGTTCACGCTGTGGAGCACCGATGCCGGCGACCTCTATACCTGGGCGCCGAGGGTCGCGGACCGGATAGCGGCAATCCCGGGACTGGCCGACGTCAACAGCGATCGCGAGCAAGGCGGTTTGCAGGCGAACCTCACCATCAACCGGCAGGCGGCGGCGCGTCTTGGTGTGCGCATTCAGGACATCAACAACGCGCTCAACAACGCCTTCGCTCAGCGCCAGGTGTCGGTGATCTATACCCAGCGTAATCAGTATCGCGTCATCCTGGAGGTGGATCCGCGCTATCAGCAGGATCCAGAGGACCTGCAGCACATCTTCGTCCCTGGCTATGACGACGCGCAGATACCGCTGCGGCCTTACTGCGGACATGACGCTCGACGAGGCGCAGGCCGCCATCAAGCAGGCCATTGCCGAGCTGCACCTGCCGGACAGCATCCGCGCCGAGGCGGCCGGCGATGCCAAGGCCTTCGCGCAGCAGGGCAACATGCAGGTGCTGCTGATCATTGCCGCGCTGCTCGCGGTCTACATCGTGCTCGGCGTACTCTACGAGAGCCTCGCGCATCCGGTCACGATCATCTCGACGCTGCCATCGGCAGGCCTCGGCGCGCTGATTGCGCTGCGCTTCTATGGCATGGAGCTGTCGGTCATTGCCTTCATCGGCATCATCCTGCTGATCGGCATCGTCAAGAAGAATGGCATCATGCTCGTCGATTTCGCCCTCGAGGCCGAGCGCGGCCAGAAGCTCTCGCCCGAGCAGGCCATCATCGAGGCGGCACGGGAGCGCTTCCGTCCCATCATGATGACGACCTTTGCGGCACTGCTCGGCGCCGTCCCCCTCGCTATGGCAACGGGACCGGGGTCGGAGCTGCGCCGTCCGCTCGGCGTCGCCATCATCGGCGGTCTGCTGGTGTCGCAGGTGCTCACCCTCTACACCACGCCGATCATCTATCTGCTGCTGGACAGATTGCACCGGCGCCTTGGCGGCGAAGGCCAGGCCGGATTGGTACGCAATGA
PROTEIN sequence
Length: 980
MNFSQPFIERPIGTILLAIGLVLLGCVAYRFLPVASMPSVEFPTIRVTASLPGADPETMAARVAAPLERRLGEIPGVTEITSTNALGSTRIAIQFALNRSIEGAAQDVQAAINAAAAELPADMPSLPRFRKSNPAAAPILILALTSQTIAASDMYDAADTVIAQRISQIDGVAEVTIAGAEQPAIRIRVNPRQLAAMNMSIETVRLAITRANAVAPLGIIDGDRNVIALEANSQLRSVEDYESIIVKSVAGGAVVRLKDVATVEQSTRNSRSQAMFNGRPAILLTIVKSADANVIETVDRVLELMPEIKWWVPAGMELSVLSDRTATLRASVHDMQITLGLSIALVMVVVYVFLRRPTPTIAAGVTVPLSLAGTCAAMWLAGFSINNLTLMALAVSVGFVVDDAIVMIENVFRNLEKGWSPMRAALEGARQIGFTVVSISISLIAAFIPLLFMNDVTPMICAHFVRSPPSPNATWLDRIVETVFGWALRIYTVTLTIAIRHKVVMLATLIATVVLTADLYIKSPKGYFPRDDTGLIFAGTRAHTDTSFDTMARLQQQALDIVLADPAVANVGSSVGASGFSASANRGRMFISLKPLAERNNLPTARVIDRLRRELSQVRGLGVFLAAAQDIRTGARQADSDYQFTLWSTDAGDLYTWAPRVADRIAAIPGLADVNSDREQGGLQANLTINRQAAARLGVRIQDINNALNNAFAQRQVSVIYTQRNQYRVILEVDPRYQQDPEDLQHIFVPGYDDAQIPLRPYCGHDARRGAGRHQAGHCRAAPAGQHPRRGGRRCQGLRAAGQHAGAADHCRAARGLHRARRTLREPRASGHDHLDAAIGRPRRADCAALLWHGAVGHCLHRHHPADRHRQEEWHHARRFRPRGRARPEALARAGHHRGGTGALPSHHDDDLCGTARRRPPRYGNGTGVGAAPSARRRHHRRSAGVAGAHPLHHADHLSAAGQIAPAPWRRRPGRIGTQ*