ggKbase home page

scnpilot_expt_750_bf_scaffold_8818_4

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_63_6_partial

megabin RP 44 / 55 MC: 15 BSCG 44 / 51 MC: 12 ASCG 9 / 38 MC: 2
Location: 2916..3779

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI000370540E similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 281.0
  • Bit_score: 356
  • Evalue 3.40e-95
  • rbh
LysR family transcriptional regulator HdfR similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 281.0
  • Bit_score: 414
  • Evalue 3.00e-113
  • rbh
LysR family transcriptional regulator HdfR {ECO:0000313|EMBL:BAQ16592.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanib similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 281.0
  • Bit_score: 414
  • Evalue 1.50e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methyloceanibacter caenitepidi → Methyloceanibacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGGACATCGAGCTGGCACGGACCTTCATCGAGATCGTCAAGACCCGCAGCTTCGTGCGGGCAGCGGAGCGGCTCAACATCAGCCAGACAGCGGTCAGTGCACGTGTGCGCGCCCTGGAAGAGCGGCTTGGCCGCCCCTTGTTCGTCCGCAACAAGAACGGCGCGTCGCTGACGCCGGCCGGCGAGCAGCTCCTGCGCTACGCGCCGATGTTCGTGCAGCTTTGGGAGAGGGCACGTCACCAAGTCGCGGTGCCGAAGGGACGACGCGCGGTTCTGACCATCGGCGGCGAGCTGAGCCTTTGGCATCCCTGGCTCGTGGACTGGCTGCATTGGATGCGCCGTACAGCGCCGGATGTGGCGCTGCGTGTGCAGGTCGGCTTGCCGGAGAGTCTGATCGATCAGGTCGCCGCCGGCGCACTCGACGTTGCGGTCCTCTATGCCCCGCAGTATCGGCCGGGCACGCGCGTCGAGCAGCTCCTCGAGGAGAAGCTGGTGCTGGTTACGACCGATGCCGACGCAAAGGCTGTCGAGCCGGGAAGCTACGTCTATGTCGATTGGGGGCCCGATTTCGCGCATCATCACGAGCTGAGCTTTCCCGATGGGGCAAACCCCGGGATATTCGTCGGGCTTGGGCCACTTGCGCTGACCTACATCCTCGAAGCCGGCGGATCGGGATACTTCCGCAAGCGTGTCGTAGAGCCGCTCATTGCTGATGGAAAGCTGCACCTCGTGGCCGGCGCGCCGAGCCTTACCTATCCTGTCTATGCTATGTGCTCGGCACATGCCGACGACGAGCTGATCTCGCTCGCGCTGGACGCTCTGCGCGACATCGCTGCGGGGGGCGAAGCGGAGAGGGGCTCCTGA
PROTEIN sequence
Length: 288
MDIELARTFIEIVKTRSFVRAAERLNISQTAVSARVRALEERLGRPLFVRNKNGASLTPAGEQLLRYAPMFVQLWERARHQVAVPKGRRAVLTIGGELSLWHPWLVDWLHWMRRTAPDVALRVQVGLPESLIDQVAAGALDVAVLYAPQYRPGTRVEQLLEEKLVLVTTDADAKAVEPGSYVYVDWGPDFAHHHELSFPDGANPGIFVGLGPLALTYILEAGGSGYFRKRVVEPLIADGKLHLVAGAPSLTYPVYAMCSAHADDELISLALDALRDIAAGGEAERGS*